Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0958
(403 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27; Coelom... 174 5e-43
UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48; Metazo... 144 4e-34
UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173; Eukar... 134 5e-31
UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20; Coelom... 133 1e-30
UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal ... 122 4e-27
UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12; Euka... 111 5e-24
UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1; ... 109 2e-23
UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=... 93 2e-18
UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal ... 87 2e-16
UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal ... 87 2e-16
UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31... 85 4e-16
UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7; ... 83 2e-15
UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2; ... 79 2e-14
UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal ... 77 1e-13
UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9; Euteleostom... 70 2e-11
UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7; Trypanosoma... 66 2e-10
UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lambl... 62 3e-09
UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-09
UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal ... 58 6e-08
UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7; Euryar... 54 8e-07
UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillar... 50 2e-05
UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6; ... 48 7e-05
UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;... 47 2e-04
UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:... 47 2e-04
UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11; Eurya... 47 2e-04
UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5; Thermo... 45 6e-04
UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, wh... 44 0.001
UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2; Thermoprot... 43 0.002
UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1; Archae... 43 0.002
UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropy... 43 0.003
UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1; Ostreo... 42 0.005
UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1; Encepha... 41 0.008
UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1; ... 40 0.014
UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2; Desulf... 35 0.52
UniRef50_A3H875 Cluster: Ribosomal protein L31e; n=1; Caldivirga... 33 2.1
UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA... 33 2.8
UniRef50_P18138 Cluster: 50S ribosomal protein L31e; n=6; Haloba... 32 3.7
UniRef50_A6XS34 Cluster: Putative uncharacterized protein; n=1; ... 32 4.9
UniRef50_Q8TMX7 Cluster: Predicted protein; n=1; Methanosarcina ... 32 4.9
UniRef50_UPI00005EFFC7 Cluster: COG2931: RTX toxins and related ... 31 6.4
UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1; ... 31 8.5
UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA hel... 31 8.5
UniRef50_Q6L2L1 Cluster: 50S ribosomal protein L31e; n=2; Thermo... 31 8.5
>UniRef50_Q9GP16 Cluster: 60S ribosomal protein L31; n=27;
Coelomata|Rep: 60S ribosomal protein L31 - Heliothis
virescens (Noctuid moth) (Owlet moth)
Length = 124
Score = 174 bits (424), Expect = 5e-43
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD+R
Sbjct: 1 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
VDTRLNKFLWSKGVRNVPFRVR
Sbjct: 61 VDTRLNKFLWSKGVRNVPFRVR 82
Score = 87.8 bits (208), Expect = 7e-17
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE
Sbjct: 83 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 124
>UniRef50_P62899 Cluster: 60S ribosomal protein L31; n=48;
Metazoa|Rep: 60S ribosomal protein L31 - Homo sapiens
(Human)
Length = 125
Score = 144 bits (350), Expect = 4e-34
Identities = 63/82 (76%), Positives = 77/82 (93%), Gaps = 1/82 (1%)
Frame = +1
Query: 13 AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
AK GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4 AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +W+KG+RNVP+R+R
Sbjct: 64 IDTRLNKAVWAKGIRNVPYRIR 85
Score = 62.1 bits (144), Expect = 4e-09
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 368
VRLSR+RN+DEDS +KL+TLVTYVPV + K LQT NVD
Sbjct: 86 VRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123
>UniRef50_Q9V597 Cluster: 60S ribosomal protein L31; n=173;
Eukaryota|Rep: 60S ribosomal protein L31 - Drosophila
melanogaster (Fruit fly)
Length = 124
Score = 134 bits (325), Expect = 5e-31
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +WSKG+R+ PFR+R
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIR 82
Score = 66.1 bits (154), Expect = 2e-10
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRL+RRRNDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 83 VRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>UniRef50_Q9GN74 Cluster: 60S ribosomal protein L31; n=20;
Coelomata|Rep: 60S ribosomal protein L31 - Aedes aegypti
(Yellowfever mosquito)
Length = 124
Score = 133 bits (321), Expect = 1e-30
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
MAK K E+K KSAINEVVTRE T+NL++RLH VG+KKRAPRA+K +RKFAEK+MGT D+R
Sbjct: 1 MAKTKTEKKAKSAINEVVTRECTINLNRRLHKVGYKKRAPRAVKIVRKFAEKEMGTNDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK LW +G+RN PFR+R
Sbjct: 61 IDTRLNKALWHRGIRNPPFRIR 82
Score = 68.1 bits (159), Expect = 6e-11
Identities = 30/42 (71%), Positives = 39/42 (92%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRLSRRRNDDEDS +KL+TLVTYVPV++ K LQTENV+++++
Sbjct: 83 VRLSRRRNDDEDSPNKLYTLVTYVPVSTFKELQTENVESTED 124
>UniRef50_UPI00005A08CD Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 130
Score = 122 bits (293), Expect = 4e-27
Identities = 49/63 (77%), Positives = 61/63 (96%)
Frame = +1
Query: 64 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 243
TREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+DTRLNK +W+KG+RNVP
Sbjct: 60 TREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVP 119
Query: 244 FRV 252
+R+
Sbjct: 120 YRI 122
>UniRef50_P51420 Cluster: 60S ribosomal protein L31-3; n=12;
Eukaryota|Rep: 60S ribosomal protein L31-3 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 119
Score = 111 bits (267), Expect = 5e-24
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = +1
Query: 28 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLN 207
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD +LN
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 208 KFLWSKGVRNVPFRVR 255
K +WSKG+R P R+R
Sbjct: 61 KQIWSKGIRGPPRRIR 76
Score = 38.7 bits (86), Expect = 0.042
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 368
VR++R+RNDDED+ + F+LVT +P + GL T+ ++
Sbjct: 77 VRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIE 116
>UniRef50_Q4PI65 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 175
Score = 109 bits (262), Expect = 2e-23
Identities = 49/80 (61%), Positives = 64/80 (80%)
Frame = +1
Query: 16 KPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 195
K + +K +SA+N+VVTREYTVNLHKR+H V FKKRAPRAIKE+ FA+K MGT D+R+D
Sbjct: 55 KSQKGKKTRSALNDVVTREYTVNLHKRVHDVAFKKRAPRAIKEVVAFAQKAMGTKDVRLD 114
Query: 196 TRLNKFLWSKGVRNVPFRVR 255
+LN+ +W GV+N P R+R
Sbjct: 115 PKLNQEVWKYGVKNFPRRLR 134
Score = 37.9 bits (84), Expect = 0.074
Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFT-LVTYVPVASIKGLQTENVD 368
VRL R+RNDDE + KL+T V + + + KGLQT +D
Sbjct: 135 VRLERKRNDDEGAKEKLYTYAVPVLGLGTAKGLQTTVID 173
>UniRef50_Q22DH9 Cluster: 60S ribosomal protein L31, putative; n=1;
Tetrahymena thermophila SB210|Rep: 60S ribosomal protein
L31, putative - Tetrahymena thermophila SB210
Length = 111
Score = 93.1 bits (221), Expect = 2e-18
Identities = 39/60 (65%), Positives = 49/60 (81%)
Frame = +1
Query: 76 TVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVR 255
TVNLHK+ H + FKK+APRAI+EI A+K MGT D+R+DT LNKF+WS G+RN+P RVR
Sbjct: 12 TVNLHKQCHKISFKKKAPRAIREIVAIAKKTMGTDDVRIDTELNKFIWSNGIRNIPRRVR 71
Score = 35.1 bits (77), Expect = 0.52
Identities = 16/39 (41%), Positives = 25/39 (64%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDA 371
VRL +R+N++E + + +TLV ++ V S GL TE A
Sbjct: 72 VRLCKRKNEEEGAQSQFYTLVQHLQVDSYHGLLTEKTKA 110
>UniRef50_UPI0000DA1BEE Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L31 - Rattus norvegicus
Length = 163
Score = 86.6 bits (205), Expect = 2e-16
Identities = 40/62 (64%), Positives = 49/62 (79%)
Frame = +1
Query: 13 AKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 192
AK G++KG SAINE+VTREYT+N+HKR+H VGFK AP A+KEI KFA K MGTP+ +
Sbjct: 4 AKKGGKKKGHSAINEMVTREYTINIHKRIHEVGFKMHAPWALKEIWKFAIKAMGTPEFVI 63
Query: 193 DT 198
T
Sbjct: 64 CT 65
>UniRef50_UPI0000D9FB71 Cluster: PREDICTED: similar to ribosomal
protein L31, partial; n=1; Macaca mulatta|Rep:
PREDICTED: similar to ribosomal protein L31, partial -
Macaca mulatta
Length = 129
Score = 86.6 bits (205), Expect = 2e-16
Identities = 42/77 (54%), Positives = 56/77 (72%)
Frame = +1
Query: 61 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 240
VTR YT N+ K + GVGFKKR P+A+KEI+KFA K+M T D+R+DTR NK +W+KG NV
Sbjct: 25 VTRGYTSNIQKHIRGVGFKKRGPQALKEIQKFAMKEMRTLDVRLDTRQNKAVWNKGTSNV 84
Query: 241 PFRVR*GFHEDVMMMKI 291
+ GF E++M + I
Sbjct: 85 SWVPICGF-ENMMKLNI 100
Score = 31.9 bits (69), Expect = 4.9
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +3
Query: 297 HKLFTLVTYVPVASIKGL 350
HKL+TL+TYVPV + K L
Sbjct: 101 HKLYTLITYVPVTTFKNL 118
>UniRef50_UPI0001505641 Cluster: 60S ribosomal protein L31 (RPL31C);
n=1; Arabidopsis thaliana|Rep: 60S ribosomal protein L31
(RPL31C) - Arabidopsis thaliana
Length = 85
Score = 85.4 bits (202), Expect = 4e-16
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +1
Query: 28 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVD 195
E+KG+ EV+TREYT+NLH+RLH FKK+AP+AIKEIRKFAEK MGT D+RVD
Sbjct: 3 EKKGRK--EEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
>UniRef50_Q7RSL1 Cluster: Ribosomal protein L31e, putative; n=7;
Apicomplexa|Rep: Ribosomal protein L31e, putative -
Plasmodium yoelii yoelii
Length = 142
Score = 83.4 bits (197), Expect = 2e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +1
Query: 64 TREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 243
T+ T+NL K H V +K++APRAIKEI+ A K M T D+R+D +LNKF+WSKG+RN P
Sbjct: 39 TKVITINLSKLTHDVCYKRKAPRAIKEIKNIAGKLMHTKDVRLDVKLNKFIWSKGIRNPP 98
Query: 244 FRVR 255
RVR
Sbjct: 99 KRVR 102
Score = 39.9 bits (89), Expect = 0.018
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTE 359
V++ R RN+DEDS +++TLV +V V S KGL E
Sbjct: 103 VKIERVRNEDEDSKERMYTLVQHVMVDSYKGLVNE 137
>UniRef50_UPI000049A444 Cluster: 60S ribosomal protein L31; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L31 - Entamoeba histolytica HM-1:IMSS
Length = 150
Score = 79.4 bits (187), Expect = 2e-14
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +1
Query: 1 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP 180
K+ KP E K K +TRE T+++HK LH FKKRAP+AIK IR A K M T
Sbjct: 28 KVGNKKPSKEIKAKEMAP--ITREMTIHMHKYLHKESFKKRAPKAIKIIRFLAIKTMKTH 85
Query: 181 DIRVDTRLNKFLWSKGVRNVPFRVR 255
+++ D LN+F+WS+G+R+V R+R
Sbjct: 86 NVKFDMGLNQFIWSQGIRSVADRIR 110
Score = 38.3 bits (85), Expect = 0.056
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQ 377
VR++R + E+ K +TLV+YVPVAS KGL T+ V+ ++
Sbjct: 111 VRMARLPMEGEEG--KFYTLVSYVPVASFKGLVTKTVEETE 149
>UniRef50_UPI00005A10F5 Cluster: PREDICTED: similar to ribosomal
protein L31; n=2; Eutheria|Rep: PREDICTED: similar to
ribosomal protein L31 - Canis familiaris
Length = 175
Score = 77.4 bits (182), Expect = 1e-13
Identities = 30/47 (63%), Positives = 42/47 (89%)
Frame = +1
Query: 115 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVR 255
+K RA+K+IRKFA K++GTPD+R+DTRLNK +W+KG+RNVP+R+R
Sbjct: 89 RKERRRALKDIRKFAMKELGTPDVRIDTRLNKAVWAKGIRNVPYRIR 135
Score = 62.9 bits (146), Expect = 2e-09
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 368
VRLSR+RN+DEDS +KL+TLVTYVPV ++K LQT NVD
Sbjct: 136 VRLSRKRNEDEDSPNKLYTLVTYVPVTTLKNLQTVNVD 173
>UniRef50_Q6Y207 Cluster: Ribosomal protein L31; n=9;
Euteleostomi|Rep: Ribosomal protein L31 - Pagrus major
(Red sea bream) (Chrysophrys major)
Length = 91
Score = 70.1 bits (164), Expect = 2e-11
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +1
Query: 133 AIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVR 255
A IRKFA K+MGTPD+R+DTRLNK +WSKGVRNVP+R+R
Sbjct: 11 APSRIRKFAVKEMGTPDVRMDTRLNKAVWSKGVRNVPYRMR 51
Score = 64.1 bits (149), Expect = 1e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVD 368
VRLSR+RN+DEDS +KL+TLVTYVPV + KGLQT NVD
Sbjct: 52 VRLSRKRNEDEDSPNKLYTLVTYVPVTTCKGLQTVNVD 89
>UniRef50_Q1X7K2 Cluster: Ribosomal protein L31; n=7;
Trypanosomatidae|Rep: Ribosomal protein L31 - Leishmania
major
Length = 188
Score = 66.1 bits (154), Expect = 2e-10
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +1
Query: 55 EVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR 234
+ V+ E T++L K L F KRAP AIK I+ F + M T D R+D LN ++W KGV+
Sbjct: 82 DAVSMEATIHLSKLLKKKTFSKRAPLAIKRIKAFVGRLMKTKDNRIDASLNTYIWHKGVK 141
Query: 235 NVPFRVR 255
VP RVR
Sbjct: 142 GVPGRVR 148
Score = 33.9 bits (74), Expect = 1.2
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLF-TLVTYVPVASIKGLQTENVD 368
V + R+ E + HK F T+++ VPVAS KGL T+ V+
Sbjct: 149 VLIQRKSETTEGNKHKHFYTVISNVPVASFKGLTTKTVE 187
>UniRef50_Q7QSE2 Cluster: GLP_426_16236_15916; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_426_16236_15916 - Giardia lamblia
ATCC 50803
Length = 106
Score = 62.5 bits (145), Expect = 3e-09
Identities = 28/65 (43%), Positives = 42/65 (64%)
Frame = +1
Query: 61 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNV 240
+ E+T+ L+K + G KK AP AI+ IR EK D+R+D +N F+WS+G+R+V
Sbjct: 3 IVYEHTIRLNKAVRGKPSKKAAPIAIRAIRAQVEKLAKVEDVRLDPSVNVFVWSRGIRHV 62
Query: 241 PFRVR 255
P R+R
Sbjct: 63 PRRIR 67
>UniRef50_Q06740 Cluster: Putative uncharacterized protein; n=1;
Saccharomyces cerevisiae|Rep: Putative uncharacterized
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 77
Score = 62.1 bits (144), Expect = 4e-09
Identities = 36/61 (59%), Positives = 39/61 (63%)
Frame = -3
Query: 239 TFLTPLDQRNLFKRVSTRMSGVPICFSANFRISLIALGARFLNPTP*SRLCKLTVYSRVT 60
T LT L Q F + R S VP+C ANF ISL ALGA FL TP + LCKL VYSRVT
Sbjct: 17 TPLTLLFQIAWFNSGARRTSSVPMCNLANFLISLTALGALFLKETPCNLLCKLMVYSRVT 76
Query: 59 T 57
T
Sbjct: 77 T 77
>UniRef50_UPI00005A550D Cluster: PREDICTED: similar to ribosomal
protein L31; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L31 - Canis familiaris
Length = 141
Score = 58.0 bits (134), Expect = 6e-08
Identities = 25/49 (51%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = +1
Query: 109 GFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVR-NVPFRV 252
GF++ P +KEIRKFA K+MGTPD+ +D NK + ++G+R NVP R+
Sbjct: 49 GFREACPSGLKEIRKFAMKEMGTPDVHMDPGFNKAVQAEGIRNNVPHRI 97
Score = 39.9 bits (89), Expect = 0.018
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +3
Query: 252 PVRLSRRRNDDEDSAHKLFTLVTYVPVAS 338
PVRLSR+ +DEDS +KL+ LVT VPV +
Sbjct: 98 PVRLSRKCKEDEDSPNKLYRLVTCVPVTT 126
>UniRef50_P54009 Cluster: 50S ribosomal protein L31e; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanococcus jannaschii
Length = 87
Score = 54.4 bits (125), Expect = 8e-07
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1
Query: 67 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPF 246
R YT+ L ++ KRAPRAIK+I++F ++ M +++D LN+ +W +G++ P
Sbjct: 9 RIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPA 68
Query: 247 RVR 255
RVR
Sbjct: 69 RVR 71
>UniRef50_Q98RR6 Cluster: 60S ribosomal protein L31; n=1; Guillardia
theta|Rep: 60S ribosomal protein L31 - Guillardia theta
(Cryptomonas phi)
Length = 97
Score = 49.6 bits (113), Expect = 2e-05
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = +1
Query: 82 NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVR 255
N+HKR+ G F KR AIKEI+KFA K +IR++ LN + S G N P +++
Sbjct: 15 NIHKRVFGKKFNKRVSIAIKEIKKFAWKLTKCNNIRIEPELNMQICSNGSSNPPNKLK 72
>UniRef50_A2EKX9 Cluster: Ribosomal protein L31e, putative; n=6;
Trichomonas vaginalis G3|Rep: Ribosomal protein L31e,
putative - Trichomonas vaginalis G3
Length = 133
Score = 48.0 bits (109), Expect = 7e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = +1
Query: 70 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFR 249
E T++L K +H + RA RAIK I A+K M T +++D LN +W G P R
Sbjct: 34 ETTIHLQKAVHNTTRRFRAERAIKVITAAAKKMMHTEVVKIDPELNSRIWIHGKNCPPAR 93
Query: 250 VR 255
VR
Sbjct: 94 VR 95
Score = 38.3 bits (85), Expect = 0.056
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 246 PCPVRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENV 365
P VR+ R DE+ A K+ T+ +Y VAS GLQT+ V
Sbjct: 91 PARVRVVFERKADEEDAEKMVTIASYKNVASFNGLQTQKV 130
>UniRef50_UPI00015BAD97 Cluster: LSU ribosomal protein L31E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L31E - Ignicoccus hospitalis KIN4/I
Length = 101
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 73 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNKFLWSKGVRNVPF 246
YT+NL +RL+ RA RA++ +R+F + G D+++D +N +LWS + P
Sbjct: 10 YTINL-RRLYWGRRSNRAKRAVRMVREFVARHFGVEPEDVKIDNTVNNYLWSGSITKPPA 68
Query: 247 RVR 255
RV+
Sbjct: 69 RVQ 71
>UniRef50_Q74MC9 Cluster: NEQ364; n=1; Nanoarchaeum equitans|Rep:
NEQ364 - Nanoarchaeum equitans
Length = 79
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/58 (34%), Positives = 32/58 (55%)
Frame = +1
Query: 70 EYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVP 243
EYTVNL K + KR +A+K +++F + +++ LNKF+W +G R P
Sbjct: 2 EYTVNLRKAVLVTSRFKRTKKAVKALKEFVMRHTKAKIVKISQELNKFIWKRGGRKPP 59
>UniRef50_Q8PYQ4 Cluster: 50S ribosomal protein L31e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L31e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 93
Score = 46.8 bits (106), Expect = 2e-04
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 37 GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGT--PDIRVDTRLNK 210
GK A + V + YT+ L + + V KRA RA+KE+R F + M T +++D +N+
Sbjct: 3 GKMADDMVKEQIYTIPL-REVRKVPAWKRAGRAVKEVRGFLVRHMKTEAEQVKLDKTINE 61
Query: 211 FLWSKGVRNVPFRVR 255
LW KG P +R
Sbjct: 62 CLWEKGCEKPPLSIR 76
>UniRef50_Q8U3S7 Cluster: 50S ribosomal protein L31e; n=5;
Thermococcaceae|Rep: 50S ribosomal protein L31e -
Pyrococcus furiosus
Length = 95
Score = 44.8 bits (101), Expect = 6e-04
Identities = 19/61 (31%), Positives = 36/61 (59%)
Frame = +1
Query: 73 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRV 252
+TV + K V KRAPRA+K +R+F + ++ +D ++N+ +W +G+ P ++
Sbjct: 11 FTVPIKKIKKIVPRWKRAPRAVKFVREFVARHAKAQEVIIDPKVNEKIWERGIEKPPSKL 70
Query: 253 R 255
R
Sbjct: 71 R 71
>UniRef50_A0CQV2 Cluster: Chromosome undetermined scaffold_24, whole
genome shotgun sequence; n=9; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_24,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 372
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +1
Query: 115 KKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRVR 255
KKR + + A K M T D+R+D LN+ +W++G+RN+P R+R
Sbjct: 286 KKRPQKLSLILLISARKNMLTEDVRIDPSLNEAVWARGIRNLPRRIR 332
Score = 37.1 bits (82), Expect = 0.13
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTE 359
VRL R++ +++D K +TL +VPV + GL+TE
Sbjct: 333 VRLQRKKKEEDDGKGKYYTLAQHVPVDTFDGLKTE 367
>UniRef50_A0RW54 Cluster: Ribosomal protein L31E; n=2;
Thermoprotei|Rep: Ribosomal protein L31E - Cenarchaeum
symbiosum
Length = 217
Score = 43.2 bits (97), Expect = 0.002
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = +1
Query: 67 REYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPF 246
R YT+ L K L +RA RAI I++FA M +IR+D ++ +W +G+++ P
Sbjct: 7 RVYTIPLGKVLLSPD-NRRAMRAINMIKEFATHHMKNANIRIDEEVSHQIWLRGIKSPPR 65
Query: 247 RVR 255
++R
Sbjct: 66 KIR 68
>UniRef50_O28213 Cluster: 50S ribosomal protein L31e; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L31e -
Archaeoglobus fulgidus
Length = 88
Score = 43.2 bits (97), Expect = 0.002
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +1
Query: 58 VVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP--DIRVDTRLNKFLWSKGV 231
VV R Y++ L ++ RA +A K +RKF + M ++++DT +N+ +W +G
Sbjct: 5 VVERVYSIRLRHKMKRYPRWLRAKKAAKYVRKFLSRHMKVEPENVKIDTAVNEKIWERGA 64
Query: 232 RNVPFRVR 255
P ++R
Sbjct: 65 EKPPTKIR 72
>UniRef50_Q9YD25 Cluster: 50S ribosomal protein L31e; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L31e - Aeropyrum
pernix
Length = 104
Score = 42.7 bits (96), Expect = 0.003
Identities = 19/61 (31%), Positives = 35/61 (57%)
Frame = +1
Query: 73 YTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWSKGVRNVPFRV 252
Y VNL +R++ +RA RA++ +R+F + ++ +D LN ++WS+ P RV
Sbjct: 9 YVVNL-RRVYWGRRTRRAIRAVRMVREFVRRHTKADEVVIDNELNNYIWSRSREKPPARV 67
Query: 253 R 255
+
Sbjct: 68 K 68
>UniRef50_Q00ZX3 Cluster: 60S ribosomal protein L31a; n=1;
Ostreococcus tauri|Rep: 60S ribosomal protein L31a -
Ostreococcus tauri
Length = 95
Score = 41.9 bits (94), Expect = 0.005
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +1
Query: 169 MGTPDIRVDTRLNKFLWSKGVRNVPF 246
M T D+R+D +LNK +WSKG+RNV F
Sbjct: 1 MKTSDVRIDVKLNKAVWSKGIRNVRF 26
>UniRef50_Q8SSC8 Cluster: 60S ribosomal protein L31; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L31
- Encephalitozoon cuniculi
Length = 111
Score = 41.1 bits (92), Expect = 0.008
Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = +1
Query: 43 SAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTP-DIRVDTRLNKFLW 219
S I E T E TVNL + + + K+A + ++ +++ +K + V LN FL+
Sbjct: 3 SKIEENQTVEMTVNLRRICSRLPWTKKASKVVRMLKREIQKHFREEIGVVVTNDLNNFLY 62
Query: 220 SKGVRNVPFRVR 255
S+G++ +P +VR
Sbjct: 63 SRGIKKIPNKVR 74
>UniRef50_A2X8Z3 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 93
Score = 40.3 bits (90), Expect = 0.014
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +1
Query: 52 NEVVTREYTVNLHKRLHG 105
+EVVTREYT+NLHKRLHG
Sbjct: 13 DEVVTREYTINLHKRLHG 30
>UniRef50_A3DNH4 Cluster: 50S ribosomal protein L31e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L31e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 102
Score = 35.1 bits (77), Expect = 0.52
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 61 VTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD-IRVDTRLNKFLWSKGVRN 237
+TR V KR++ RA RA++ IRK+ + + I +D +N+++WS+
Sbjct: 7 ITRSIHVIPLKRVYWGRRTNRADRAVRLIRKYVRRHFKEAEKIIIDPAVNEYVWSRSREK 66
Query: 238 VPFRV 252
P RV
Sbjct: 67 PPRRV 71
>UniRef50_A3H875 Cluster: Ribosomal protein L31e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L31e -
Caldivirga maquilingensis IC-167
Length = 86
Score = 33.1 bits (72), Expect = 2.1
Identities = 18/70 (25%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 52 NEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSK 225
NE++ T+NL + + + RAP A + I++ + + + ++++ LN LWS+
Sbjct: 4 NEIIL---TINL-RDVKEASRRIRAPYAARFIKRIIARYVKVDEDKVKLNENLNNLLWSR 59
Query: 226 GVRNVPFRVR 255
G++ P R++
Sbjct: 60 GIQKPPSRIK 69
>UniRef50_Q02B40 Cluster: HAD-superfamily hydrolase, subfamily IA,
variant 3; n=1; Solibacter usitatus Ellin6076|Rep:
HAD-superfamily hydrolase, subfamily IA, variant 3 -
Solibacter usitatus (strain Ellin6076)
Length = 202
Score = 32.7 bits (71), Expect = 2.8
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +1
Query: 73 YTV-NLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRVDTRLNKFLWS 222
YT + KRL G G +R + E R F E+ T D+RVD +WS
Sbjct: 31 YTAAEIPKRLAGTGLVERFETGLMEPRDFVEEMSRTLDLRVDYDQFSQIWS 81
>UniRef50_P18138 Cluster: 50S ribosomal protein L31e; n=6;
Halobacteriaceae|Rep: 50S ribosomal protein L31e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 92
Score = 32.3 bits (70), Expect = 3.7
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 118 KRAPRAIKEIRKFAEKQMGTPD--IRVDTRLNKFLWSKGVRNVPFRVR 255
KRA +A+ IR+ K + +R+D +N+ W++G N P ++R
Sbjct: 25 KRADKAMILIREHLAKHFSVDEDAVRLDPSINEAAWARGRANTPSKIR 72
>UniRef50_A6XS34 Cluster: Putative uncharacterized protein; n=1;
Vibrio cholerae AM-19226|Rep: Putative uncharacterized
protein - Vibrio cholerae AM-19226
Length = 663
Score = 31.9 bits (69), Expect = 4.9
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = -2
Query: 294 RNLHHHYVFVKASPDTEGNISDSLRPKEFV*ASVYSNVRSSHLFFSELSDFFDCSW---G 124
RNL + Y +A IS R K+ A Y+++ +SHL+F ++S + +W G
Sbjct: 552 RNLKYKYGVDEARKMFVAIISPPSRQKQLE-AMSYNDIFTSHLYFQDISKVIEKNWQDFG 610
Query: 123 TLFKSN 106
++FK +
Sbjct: 611 SIFKGD 616
>UniRef50_Q8TMX7 Cluster: Predicted protein; n=1; Methanosarcina
acetivorans|Rep: Predicted protein - Methanosarcina
acetivorans
Length = 122
Score = 31.9 bits (69), Expect = 4.9
Identities = 15/54 (27%), Positives = 31/54 (57%)
Frame = -2
Query: 288 LHHHYVFVKASPDTEGNISDSLRPKEFV*ASVYSNVRSSHLFFSELSDFFDCSW 127
+ + ++F+K +P+ NI R + + +NV SS+++FS++ FF+ W
Sbjct: 65 ISYFFIFIKETPNENNNIRLYNRLNKL---NTTNNVFSSNIYFSQIMIFFNIFW 115
>UniRef50_UPI00005EFFC7 Cluster: COG2931: RTX toxins and related
Ca2+-binding proteins; n=1; Escherichia coli E22|Rep:
COG2931: RTX toxins and related Ca2+-binding proteins -
Escherichia coli E22
Length = 654
Score = 31.5 bits (68), Expect = 6.4
Identities = 17/29 (58%), Positives = 18/29 (62%)
Frame = -2
Query: 300 YVRNLHHHYVFVKASPDTEGNISDSLRPK 214
YV HYVF AS D GNI+D LRPK
Sbjct: 249 YVLGGVQHYVFAVASIDAAGNITD-LRPK 276
>UniRef50_A2ELE1 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1419
Score = 31.1 bits (67), Expect = 8.5
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Frame = +1
Query: 28 ERKGKSAIN---EVVTREYTVNLHKRLHGVGFKK----RAPRAIKEIRKFAEKQMGTPDI 186
E K KSA N + + ++ V + + G+ + + P+ EIRK + + D+
Sbjct: 842 EHKKKSAENLKISINSPQFIVLAFENMRDFGYGRYDTFKRPKENAEIRKICQNILSKMDV 901
Query: 187 RVDTRLNKFLWSKGVR 234
++DT +KFL S +R
Sbjct: 902 QIDTSHSKFLLSISLR 917
>UniRef50_Q820F4 Cluster: Holliday junction ATP-dependent DNA
helicase ruvA; n=6; Actinomycetales|Rep: Holliday
junction ATP-dependent DNA helicase ruvA - Streptomyces
avermitilis
Length = 203
Score = 31.1 bits (67), Expect = 8.5
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 1 KITMAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKR-APRAIKEIRKFAEKQMGT 177
K + +P G G AI VT + LH L G+G+ R A A+ + AE GT
Sbjct: 128 KDRLGEPLGT--GGPAIGRAVTTGWREQLHAALIGLGYATREADEAVAAVAPQAEAAGGT 185
Query: 178 PDI 186
P +
Sbjct: 186 PQV 188
>UniRef50_Q6L2L1 Cluster: 50S ribosomal protein L31e; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L31e -
Picrophilus torridus
Length = 89
Score = 31.1 bits (67), Expect = 8.5
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 118 KRAPRAIKEIRKFAEKQMGTPDIR--VDTRLNKFLWSKGVRNVPFRV 252
+RA +IK ++ + + R VD ++N+ +WS+G R VP RV
Sbjct: 26 RRADTSIKMLKDAVARYTKSDRDRIWVDNKVNELIWSRGRRKVPTRV 72
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,017,113
Number of Sequences: 1657284
Number of extensions: 6886882
Number of successful extensions: 14241
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 14035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14241
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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