Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0958
(403 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p pro... 134 3e-32
AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,... 134 3e-32
AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,... 134 3e-32
AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,... 134 3e-32
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro... 28 4.1
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB... 28 4.1
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA... 28 4.1
>AY113508-1|AAM29513.1| 124|Drosophila melanogaster RE59131p
protein.
Length = 124
Score = 134 bits (325), Expect = 3e-32
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +WSKG+R+ PFR+R
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIR 82
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRL+RRRNDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 83 VRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-889|AAM71074.1| 124|Drosophila melanogaster CG1821-PC,
isoform C protein.
Length = 124
Score = 134 bits (325), Expect = 3e-32
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +WSKG+R+ PFR+R
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIR 82
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRL+RRRNDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 83 VRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-888|AAF58920.1| 124|Drosophila melanogaster CG1821-PB,
isoform B protein.
Length = 124
Score = 134 bits (325), Expect = 3e-32
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +WSKG+R+ PFR+R
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIR 82
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRL+RRRNDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 83 VRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AE013599-887|AAM71073.1| 124|Drosophila melanogaster CG1821-PA,
isoform A protein.
Length = 124
Score = 134 bits (325), Expect = 3e-32
Identities = 59/82 (71%), Positives = 72/82 (87%)
Frame = +1
Query: 10 MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 189
M K KGE+ KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1 MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60
Query: 190 VDTRLNKFLWSKGVRNVPFRVR 255
+DTRLNK +WSKG+R+ PFR+R
Sbjct: 61 IDTRLNKHIWSKGIRSTPFRIR 82
Score = 66.1 bits (154), Expect = 2e-11
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = +3
Query: 255 VRLSRRRNDDEDSAHKLFTLVTYVPVASIKGLQTENVDASQE 380
VRL+RRRNDDEDS +KL+T VTYVPV++ K LQTENV++S +
Sbjct: 83 VRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVESSDD 124
>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p
protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 43 SAINEVVTREYTVNLHKRLHGVGFKKRA 126
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
isoform B protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 43 SAINEVVTREYTVNLHKRLHGVGFKKRA 126
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
isoform A protein.
Length = 1838
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1
Query: 43 SAINEVVTREYTVNLHKRLHGVGFKKRA 126
S+I+E VT EY +LH HG GF ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,549,624
Number of Sequences: 53049
Number of extensions: 332822
Number of successful extensions: 609
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1170601320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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