Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0950
         (680 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            24   3.9  
DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.       23   8.9  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
 Frame = +3

Query: 279 RILLMGLRRSGKSSIQ----KVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFP 446
           +++L+G    GKSS+     K  FH+   +       T  +  DD      V+F+IWD  
Sbjct: 26  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTT----VKFEIWDTA 81

Query: 447 GQ 452
           GQ
Sbjct: 82  GQ 83


>DQ182017-1|ABA56309.1|  383|Anopheles gambiae G(alpha)s protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +3

Query: 279 RILLMGLRRSGKSSIQK 329
           R+LL+G   SGKS+I K
Sbjct: 46  RLLLLGAGESGKSTIVK 62


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,703
Number of Sequences: 2352
Number of extensions: 14455
Number of successful extensions: 16
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68577420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)