BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0950 (680 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC016668-1|AAH16668.1| 399|Homo sapiens Ras-related GTP binding... 153 7e-37 AL139260-1|CAI23049.1| 399|Homo sapiens Ras-related GTP binding... 153 7e-37 AF323609-1|AAG45221.1| 399|Homo sapiens GTPase-interacting prot... 153 7e-37 AF272035-1|AAG32662.1| 399|Homo sapiens Rag C protein. 153 7e-37 AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiqui... 149 1e-35 AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein. 149 1e-35 BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein. 51 3e-06 AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA seq... 51 3e-06 X90529-1|CAA62131.1| 313|Homo sapiens ragA protein. 40 0.008 U41654-1|AAB63255.1| 313|Homo sapiens adenovirus E3-14.7K inter... 40 0.008 BC034726-1|AAH34726.1| 346|Homo sapiens Ras-related GTP binding... 40 0.008 BC009990-1|AAH09990.1| 313|Homo sapiens Ras-related GTP binding... 40 0.008 BC006433-1|AAH06433.1| 313|Homo sapiens Ras-related GTP binding... 40 0.008 AL831926-1|CAD38586.1| 346|Homo sapiens hypothetical protein pr... 40 0.008 AL356000-6|CAH72136.1| 313|Homo sapiens Ras-related GTP binding... 40 0.008 AL159987-6|CAH70828.1| 194|Homo sapiens Ras-related GTP binding... 40 0.008 AL159987-5|CAH70827.1| 346|Homo sapiens Ras-related GTP binding... 40 0.008 AL139277-3|CAI40806.1| 194|Homo sapiens Ras-related GTP binding... 40 0.008 AL139277-2|CAI40805.1| 346|Homo sapiens Ras-related GTP binding... 40 0.008 X90530-1|CAA62132.1| 374|Homo sapiens ragB protein. 32 2.2 AL159987-4|CAH70826.1| 374|Homo sapiens Ras-related GTP binding... 32 2.2 AL139277-1|CAI40804.1| 374|Homo sapiens Ras-related GTP binding... 32 2.2 >BC016668-1|AAH16668.1| 399|Homo sapiens Ras-related GTP binding C protein. Length = 399 Score = 153 bits (370), Expect = 7e-37 Identities = 71/83 (85%), Positives = 75/83 (90%) Frame = +3 Query: 264 DDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDF 443 D KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I KDDI+NSSFV FQIWDF Sbjct: 58 DSSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDF 117 Query: 444 PGQIDFFDPTFDSDTIFGGCGAL 512 PGQ+DFFDPTFD + IF G GAL Sbjct: 118 PGQMDFFDPTFDYEMIFRGTGAL 140 Score = 69.7 bits (163), Expect = 9e-12 Identities = 29/44 (65%), Positives = 39/44 (88%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L++VIDAQDDY +AL +L +TV+KAY+VN ++ FEVFIHKVDG Sbjct: 139 ALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDG 182 >AL139260-1|CAI23049.1| 399|Homo sapiens Ras-related GTP binding C protein. Length = 399 Score = 153 bits (370), Expect = 7e-37 Identities = 71/83 (85%), Positives = 75/83 (90%) Frame = +3 Query: 264 DDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDF 443 D KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I KDDI+NSSFV FQIWDF Sbjct: 58 DSSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDF 117 Query: 444 PGQIDFFDPTFDSDTIFGGCGAL 512 PGQ+DFFDPTFD + IF G GAL Sbjct: 118 PGQMDFFDPTFDYEMIFRGTGAL 140 Score = 69.7 bits (163), Expect = 9e-12 Identities = 29/44 (65%), Positives = 39/44 (88%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L++VIDAQDDY +AL +L +TV+KAY+VN ++ FEVFIHKVDG Sbjct: 139 ALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDG 182 >AF323609-1|AAG45221.1| 399|Homo sapiens GTPase-interacting protein 2 protein. Length = 399 Score = 153 bits (370), Expect = 7e-37 Identities = 71/83 (85%), Positives = 75/83 (90%) Frame = +3 Query: 264 DDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDF 443 D KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I KDDI+NSSFV FQIWDF Sbjct: 58 DSSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDF 117 Query: 444 PGQIDFFDPTFDSDTIFGGCGAL 512 PGQ+DFFDPTFD + IF G GAL Sbjct: 118 PGQMDFFDPTFDYEMIFRGTGAL 140 Score = 69.7 bits (163), Expect = 9e-12 Identities = 29/44 (65%), Positives = 39/44 (88%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L++VIDAQDDY +AL +L +TV+KAY+VN ++ FEVFIHKVDG Sbjct: 139 ALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDG 182 >AF272035-1|AAG32662.1| 399|Homo sapiens Rag C protein. Length = 399 Score = 153 bits (370), Expect = 7e-37 Identities = 71/83 (85%), Positives = 75/83 (90%) Frame = +3 Query: 264 DDHKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDF 443 D KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I KDDI+NSSFV FQIWDF Sbjct: 58 DSSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDF 117 Query: 444 PGQIDFFDPTFDSDTIFGGCGAL 512 PGQ+DFFDPTFD + IF G GAL Sbjct: 118 PGQMDFFDPTFDYEMIFRGTGAL 140 Score = 69.7 bits (163), Expect = 9e-12 Identities = 29/44 (65%), Positives = 39/44 (88%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L++VIDAQDDY +AL +L +TV+KAY+VN ++ FEVFIHKVDG Sbjct: 139 ALIYVIDAQDDYMEALTRLHITVSKAYKVNPDMNFEVFIHKVDG 182 >AL138717-3|CAB99362.1| 400|Homo sapiens protein ( onical ubiquitin conjugating ).). Length = 400 Score = 149 bits (360), Expect = 1e-35 Identities = 68/80 (85%), Positives = 74/80 (92%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I ++D++NSSFV FQIWDFPGQ Sbjct: 62 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQ 121 Query: 453 IDFFDPTFDSDTIFGGCGAL 512 IDFFDPTFD + IF G GAL Sbjct: 122 IDFFDPTFDYEMIFRGTGAL 141 Score = 72.5 bits (170), Expect = 1e-12 Identities = 31/44 (70%), Positives = 40/44 (90%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L+FVID+QDDY +AL +L LTVT+AY+VN++I FEVFIHKVDG Sbjct: 140 ALIFVIDSQDDYMEALARLHLTVTRAYKVNTDINFEVFIHKVDG 183 >AF272036-1|AAG32663.1| 400|Homo sapiens Rag D protein. Length = 400 Score = 149 bits (360), Expect = 1e-35 Identities = 68/80 (85%), Positives = 74/80 (92%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTN+I ++D++NSSFV FQIWDFPGQ Sbjct: 62 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQ 121 Query: 453 IDFFDPTFDSDTIFGGCGAL 512 IDFFDPTFD + IF G GAL Sbjct: 122 IDFFDPTFDYEMIFRGTGAL 141 Score = 72.5 bits (170), Expect = 1e-12 Identities = 31/44 (70%), Positives = 40/44 (90%) Frame = +2 Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +L+FVID+QDDY +AL +L LTVT+AY+VN++I FEVFIHKVDG Sbjct: 140 ALIFVIDSQDDYMEALARLHLTVTRAYKVNTDINFEVFIHKVDG 183 >BC003088-1|AAH03088.1| 249|Homo sapiens RRAGD protein protein. Length = 249 Score = 51.2 bits (117), Expect = 3e-06 Identities = 22/31 (70%), Positives = 28/31 (90%) Frame = +2 Query: 545 DALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +AL +L LTVT+AY+VN++I FEVFIHKVDG Sbjct: 2 EALARLHLTVTRAYKVNTDINFEVFIHKVDG 32 >AL138717-2|CAB99361.1| 249|Homo sapiens protein ( Human DNA sequence from clone RP11-11D8 on chromosome 6 Contains the5' end of the NCUBE1 gene for non-canonical ubiquitin conjugating ). Length = 249 Score = 51.2 bits (117), Expect = 3e-06 Identities = 22/31 (70%), Positives = 28/31 (90%) Frame = +2 Query: 545 DALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637 +AL +L LTVT+AY+VN++I FEVFIHKVDG Sbjct: 2 EALARLHLTVTRAYKVNTDINFEVFIHKVDG 32 >X90529-1|CAA62131.1| 313|Homo sapiens ragA protein. Length = 313 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 67 DTFMENYFTSQRDNIF 82 >U41654-1|AAB63255.1| 313|Homo sapiens adenovirus E3-14.7K interacting protein 1 protein. Length = 313 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 67 DTFMENYFTSQRDNIF 82 >BC034726-1|AAH34726.1| 346|Homo sapiens Ras-related GTP binding B protein. Length = 346 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 99 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 100 DTFMENYFTSQRDNIF 115 >BC009990-1|AAH09990.1| 313|Homo sapiens Ras-related GTP binding A protein. Length = 313 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 67 DTFMENYFTSQRDNIF 82 >BC006433-1|AAH06433.1| 313|Homo sapiens Ras-related GTP binding A protein. Length = 313 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 67 DTFMENYFTSQRDNIF 82 >AL831926-1|CAD38586.1| 346|Homo sapiens hypothetical protein protein. Length = 346 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 99 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 100 DTFMENYFTSQRDNIF 115 >AL356000-6|CAH72136.1| 313|Homo sapiens Ras-related GTP binding A protein. Length = 313 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 67 DTFMENYFTSQRDNIF 82 >AL159987-6|CAH70828.1| 194|Homo sapiens Ras-related GTP binding B protein. Length = 194 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 2 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 61 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 62 DTFMENYFTSQRDNIF 77 >AL159987-5|CAH70827.1| 346|Homo sapiens Ras-related GTP binding B protein. Length = 346 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 99 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 100 DTFMENYFTSQRDNIF 115 >AL139277-3|CAI40806.1| 194|Homo sapiens Ras-related GTP binding B protein. Length = 194 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 2 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 61 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 62 DTFMENYFTSQRDNIF 77 >AL139277-2|CAI40805.1| 346|Homo sapiens Ras-related GTP binding B protein. Length = 346 Score = 39.9 bits (89), Expect = 0.008 Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452 K ++LLMG SGK+S++ ++F +T L +T + + + +WD GQ Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 99 Query: 453 IDFFDPTFDS--DTIF 494 F + F S D IF Sbjct: 100 DTFMENYFTSQRDNIF 115 >X90530-1|CAA62132.1| 374|Homo sapiens ragB protein. Length = 374 Score = 31.9 bits (69), Expect = 2.2 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST--NQIVKDDINNSSFVQFQIWDFP 446 K ++LLMG SGK+S++ ++F +T L +T ++I I NSS + + D Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQI-NSSLSTYSLVDSV 98 Query: 447 GQIDFFD 467 G FD Sbjct: 99 GNTKTFD 105 >AL159987-4|CAH70826.1| 374|Homo sapiens Ras-related GTP binding B protein. Length = 374 Score = 31.9 bits (69), Expect = 2.2 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST--NQIVKDDINNSSFVQFQIWDFP 446 K ++LLMG SGK+S++ ++F +T L +T ++I I NSS + + D Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQI-NSSLSTYSLVDSV 98 Query: 447 GQIDFFD 467 G FD Sbjct: 99 GNTKTFD 105 >AL139277-1|CAI40804.1| 374|Homo sapiens Ras-related GTP binding B protein. Length = 374 Score = 31.9 bits (69), Expect = 2.2 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%) Frame = +3 Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLEST--NQIVKDDINNSSFVQFQIWDFP 446 K ++LLMG SGK+S++ ++F +T L +T ++I I NSS + + D Sbjct: 40 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATILDRIHSLQI-NSSLSTYSLVDSV 98 Query: 447 GQIDFFD 467 G FD Sbjct: 99 GNTKTFD 105 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 95,357,317 Number of Sequences: 237096 Number of extensions: 1978022 Number of successful extensions: 3155 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 3057 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3150 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 7727256732 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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