Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0950
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051510-1|AAK92934.1|  385|Drosophila melanogaster GH16429p pro...   165   7e-41
AE013599-609|AAF59120.2|  385|Drosophila melanogaster CG8707-PA ...   165   7e-41
AY047538-1|AAK77270.1|  311|Drosophila melanogaster GH04846p pro...    38   0.013
AE014297-844|AAF54312.1|  311|Drosophila melanogaster CG11968-PA...    38   0.013

>AY051510-1|AAK92934.1|  385|Drosophila melanogaster GH16429p
           protein.
          Length = 385

 Score =  165 bits (400), Expect = 7e-41
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +3

Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452
           KPRILLMG+RRSGKSSIQKVVFHKMSPNETLFLEST++IVKDDINNSSFVQFQIWDFPGQ
Sbjct: 40  KPRILLMGMRRSGKSSIQKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQ 99

Query: 453 IDFFDPTFDSDTIFGGCGAL 512
           IDFF+PTFDSD IFGGCGAL
Sbjct: 100 IDFFEPTFDSDMIFGGCGAL 119



 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637
           +LVFVIDA+DDY +AL K + TV +AY+VN  IKFEVFIHKVDG
Sbjct: 118 ALVFVIDAKDDYNEALTKFKNTVLQAYKVNKRIKFEVFIHKVDG 161


>AE013599-609|AAF59120.2|  385|Drosophila melanogaster CG8707-PA
           protein.
          Length = 385

 Score =  165 bits (400), Expect = 7e-41
 Identities = 75/80 (93%), Positives = 79/80 (98%)
 Frame = +3

Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452
           KPRILLMG+RRSGKSSIQKVVFHKMSPNETLFLEST++IVKDDINNSSFVQFQIWDFPGQ
Sbjct: 40  KPRILLMGMRRSGKSSIQKVVFHKMSPNETLFLESTSKIVKDDINNSSFVQFQIWDFPGQ 99

Query: 453 IDFFDPTFDSDTIFGGCGAL 512
           IDFF+PTFDSD IFGGCGAL
Sbjct: 100 IDFFEPTFDSDMIFGGCGAL 119



 Score = 68.5 bits (160), Expect = 8e-12
 Identities = 31/44 (70%), Positives = 37/44 (84%)
 Frame = +2

Query: 506 SLVFVIDAQDDYQDALDKLQLTVTKAYRVNSNIKFEVFIHKVDG 637
           +LVFVIDA+DDY +AL K + TV +AY+VN  IKFEVFIHKVDG
Sbjct: 118 ALVFVIDAKDDYNEALTKFKNTVLQAYKVNKRIKFEVFIHKVDG 161


>AY047538-1|AAK77270.1|  311|Drosophila melanogaster GH04846p
           protein.
          Length = 311

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +3

Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452
           K ++LLMG   SGK+S++ ++F      +T  L +T  +    +     +   +WD  GQ
Sbjct: 2   KKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 61

Query: 453 IDFFDPTF--DSDTIF 494
             F    F    D IF
Sbjct: 62  EGFMKQYFAQQRDNIF 77


>AE014297-844|AAF54312.1|  311|Drosophila melanogaster CG11968-PA
           protein.
          Length = 311

 Score = 37.9 bits (84), Expect = 0.013
 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
 Frame = +3

Query: 273 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNQIVKDDINNSSFVQFQIWDFPGQ 452
           K ++LLMG   SGK+S++ ++F      +T  L +T  +    +     +   +WD  GQ
Sbjct: 2   KKKVLLMGKSGSGKTSMRSIIFANYIARDTTRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 61

Query: 453 IDFFDPTF--DSDTIF 494
             F    F    D IF
Sbjct: 62  EGFMKQYFAQQRDNIF 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,846,046
Number of Sequences: 53049
Number of extensions: 636925
Number of successful extensions: 1107
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)