Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0950
         (680 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   0.88 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.5  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.5  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.7  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   8.2  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   8.2  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.2  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -2

Query: 505 PHPPNMVSESNVGSKKSICPGKSHI*NCTKLLL 407
           PH P +V+    G +  ICPGK  +    +L+L
Sbjct: 450 PHSPLLVAPFGAGRR--ICPGKRFVDLALQLIL 480


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 109 YTVIPICPDFC 141
           Y ++P CPD C
Sbjct: 347 YVIVPFCPDCC 357


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 109 YTVIPICPDFC 141
           Y ++P CPD C
Sbjct: 347 YVIVPFCPDCC 357


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 109 YTVIPICPDFC 141
           Y ++P CPD C
Sbjct: 347 YVIVPFCPDCC 357


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -1

Query: 395 FNNLICRF*KQCLIWRHLVKYN 330
           F N  C F +    W++ V++N
Sbjct: 534 FQNTFCYFRRNAATWKNAVRHN 555


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 311  KIINSKSCISQDVSK*DIVFRIYK 382
            KI+ S++   Q V + +I+F IYK
Sbjct: 1535 KIVVSRNKAYQKVEENEIIFEIYK 1558


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 262 KTITNHESF*WALEGLENHQFKKL 333
           K  ++H+SF  AL  +EN+   KL
Sbjct: 534 KLESSHDSFQAALRSIENYYSGKL 557


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 262 KTITNHESF*WALEGLENHQFKKL 333
           K  ++H+SF  AL  +EN+   KL
Sbjct: 572 KLESSHDSFQAALRSIENYYSGKL 595


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +2

Query: 176 IQIVMWGRSPKILPMDLSSKM 238
           I+ ++W R  ++LP++   K+
Sbjct: 519 IESIVWERDTRVLPINRKQKV 539


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,772
Number of Sequences: 438
Number of extensions: 4595
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)