Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0948
(675 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4RQD9 Cluster: Chromosome 17 SCAF15006, whole genome s... 133 3e-30
UniRef50_O75477 Cluster: Erlin-1 precursor; n=55; Eukaryota|Rep:... 132 6e-30
UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|R... 105 1e-21
UniRef50_Q70AI7 Cluster: Putative integral membrane protein that... 98 1e-19
UniRef50_UPI0000E4680B Cluster: PREDICTED: hypothetical protein;... 52 1e-05
UniRef50_Q2QSN8 Cluster: Expressed protein; n=2; Oryza sativa|Re... 34 2.7
UniRef50_Q7N1B3 Cluster: Similar to class II aminotransferase an... 34 3.6
UniRef50_A0CC00 Cluster: Chromosome undetermined scaffold_166, w... 33 6.3
>UniRef50_Q4RQD9 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 321
Score = 133 bits (322), Expect = 3e-30
Identities = 56/87 (64%), Positives = 76/87 (87%)
Frame = +3
Query: 255 VYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 434
VYYRGGALL + G+H+M+P +T+Y+++QTTLQTDE+KNVPCGTSGGV+IYF+RIEVV
Sbjct: 35 VYYRGGALLTTPNGPGYHIMLPFITTYRSVQTTLQTDEIKNVPCGTSGGVMIYFDRIEVV 94
Query: 435 NKLDPQSVLDMVRNFTAEYDRTLILIK 515
N L P +V+++V+N+TA+YD+TLI K
Sbjct: 95 NMLVPSAVVEIVKNYTADYDKTLIFNK 121
Score = 60.1 bits (139), Expect = 5e-08
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +2
Query: 506 FNKVHHELNQFCSAHTLHEVYIDLFDQIDENL 601
FNK+HHELNQFCS HTL EVYI+LFD ID L
Sbjct: 119 FNKIHHELNQFCSVHTLQEVYIELFDIIDGEL 150
>UniRef50_O75477 Cluster: Erlin-1 precursor; n=55; Eukaryota|Rep:
Erlin-1 precursor - Homo sapiens (Human)
Length = 346
Score = 132 bits (320), Expect = 6e-30
Identities = 58/87 (66%), Positives = 74/87 (85%)
Frame = +3
Query: 255 VYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 434
VYYRGGALL S G+H+M+P +T+++++QTTLQTDEVKNVPCGTSGGV+IY +RIEVV
Sbjct: 33 VYYRGGALLTSPSGPGYHIMLPFITTFRSVQTTLQTDEVKNVPCGTSGGVMIYIDRIEVV 92
Query: 435 NKLDPQSVLDMVRNFTAEYDRTLILIK 515
N L P +V D+VRN+TA+YD+TLI K
Sbjct: 93 NMLAPYAVFDIVRNYTADYDKTLIFNK 119
Score = 80.6 bits (190), Expect = 3e-14
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = +2
Query: 506 FNKVHHELNQFCSAHTLHEVYIDLFDQIDENLXQHLQKDL 625
FNK+HHELNQFCSAHTL EVYI+LFDQIDENL Q LQKDL
Sbjct: 117 FNKIHHELNQFCSAHTLQEVYIELFDQIDENLKQALQKDL 156
>UniRef50_Q9ZQ87 Cluster: Expressed protein; n=7; Magnoliophyta|Rep:
Expressed protein - Arabidopsis thaliana (Mouse-ear
cress)
Length = 356
Score = 105 bits (251), Expect = 1e-21
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +3
Query: 258 YYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVVN 437
Y+RGGALL + ++ GFH+ +P +T+Y+ +Q TLQTD+V+++PCGT GGVLI FE+IEVVN
Sbjct: 58 YWRGGALLNIITEPGFHLKLPFITNYEPVQVTLQTDQVRDIPCGTKGGVLITFEKIEVVN 117
Query: 438 KLDPQSVLDMVRNFTAEYDRTLILIK 515
+L V D + N+ YD T I K
Sbjct: 118 RLRKDFVYDTLLNYGVNYDNTWIYDK 143
Score = 64.9 bits (151), Expect = 2e-09
Identities = 24/43 (55%), Positives = 35/43 (81%)
Frame = +2
Query: 506 FNKVHHELNQFCSAHTLHEVYIDLFDQIDENLXQHLQKDLLKW 634
++K+HHE+NQFCS+H+L +VYID+FDQIDE + LQ D ++
Sbjct: 141 YDKIHHEINQFCSSHSLQQVYIDIFDQIDERMKDALQADCTRY 183
>UniRef50_Q70AI7 Cluster: Putative integral membrane protein that
regulates cation conductance; n=1; Triticum
aestivum|Rep: Putative integral membrane protein that
regulates cation conductance - Triticum aestivum (Wheat)
Length = 215
Score = 98.3 bits (234), Expect = 1e-19
Identities = 42/87 (48%), Positives = 61/87 (70%)
Frame = +3
Query: 255 VYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 434
VY+RGGALL + G+H+ +P +T ++ IQ TLQTD+VK +PCGT GGV+I F++I VV
Sbjct: 18 VYWRGGALLKTITTPGYHLKLPFITQFEPIQVTLQTDQVKGIPCGTKGGVMISFDKIGVV 77
Query: 435 NKLDPQSVLDMVRNFTAEYDRTLILIK 515
N+L+ V + + N+ YD+T I K
Sbjct: 78 NRLNKDFVYETLLNYGVHYDKTWIYDK 104
Score = 54.0 bits (124), Expect = 3e-06
Identities = 19/27 (70%), Positives = 26/27 (96%)
Frame = +2
Query: 506 FNKVHHELNQFCSAHTLHEVYIDLFDQ 586
++K+HHE+NQFCSAH+L +VYID+FDQ
Sbjct: 102 YDKIHHEINQFCSAHSLQQVYIDMFDQ 128
>UniRef50_UPI0000E4680B Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 245
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +3
Query: 255 VYYRGGALLPVTSQAGFHMMIPLLTSYKAIQTTLQT 362
VYYRGGALL TS GFH+M+P LTSY+++Q T
Sbjct: 33 VYYRGGALLQTTSGPGFHVMVPFLTSYRSVQAVRVT 68
>UniRef50_Q2QSN8 Cluster: Expressed protein; n=2; Oryza sativa|Rep:
Expressed protein - Oryza sativa subsp. japonica (Rice)
Length = 397
Score = 34.3 bits (75), Expect = 2.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = +3
Query: 168 PIFYFGHCDSGCRGHGSFFPS*SRRRTCWVYYRGGALLPVTSQAGFHMMIPLLT 329
P FY SGCR H P + R C+ Y G + QA H+++ L+T
Sbjct: 65 PAFYC--VPSGCRPHPFVLPPAALRARCFGSYNGAWIFQAVDQAANHVLLNLIT 116
>UniRef50_Q7N1B3 Cluster: Similar to class II aminotransferase and
5-aminolevulinic acid synthase; n=1; Photorhabdus
luminescens subsp. laumondii|Rep: Similar to class II
aminotransferase and 5-aminolevulinic acid synthase -
Photorhabdus luminescens subsp. laumondii
Length = 424
Score = 33.9 bits (74), Expect = 3.6
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +3
Query: 261 YRGGALLPVTSQAGFHM-MIPLLTSYKAIQTTLQT------DEVKNVPCGTSGGVLIYFE 419
Y+GGA+ TS + H+ ++PLL S L D+ + G+L F
Sbjct: 105 YQGGAVAVFTSTSNVHLGVLPLLGSGSLPNYPLSRPVHWLMDKTAHASMQVLRGILEQFG 164
Query: 420 RIEVVNKLDPQSVLDMVRNFTAEYDRTLILIKCTMN*INSVVPI 551
+ V+ D QSV ++N E RT IL+ + +N ++P+
Sbjct: 165 PVSRVDSADAQSVQQALQN-CKENQRTPILLIDGIGSMNGLIPV 207
>UniRef50_A0CC00 Cluster: Chromosome undetermined scaffold_166, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_166, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 2733
Score = 33.1 bits (72), Expect = 6.3
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 512 KVHHELNQFCSAHTLHEVYIDLFDQIDENLXQHL-QKDLLKWLQ 640
++ + + + + + +DLF+QIDEN Q L Q++LLK LQ
Sbjct: 2115 QIKKQADNIVQSQDIEQEILDLFNQIDENKNQQLDQRELLKALQ 2158
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,329,633
Number of Sequences: 1657284
Number of extensions: 12976083
Number of successful extensions: 26437
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26431
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52066120554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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