Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0948
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           26   1.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.9  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    24   3.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    24   3.8  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   6.7  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   8.8  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +3

Query: 330 SYKAIQTTLQTDEVKNVPCGTSGGVLIYFERIEVV 434
           S++AI T LQ   +K VP G    V  YFE  E+V
Sbjct: 646 SWQAIATALQ---MKGVPAGLQRIVRSYFENRELV 677


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 593  ENLXQHLQKDLLKWLQVLRGSK 658
            ENL QHL +D   W ++   +K
Sbjct: 980  ENLQQHLLRDAESWSRICEAAK 1001


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 263 SGWSFITSYKSSWFSHDDTTSNIIQSHSDNFTN 361
           +G + I    SSW    D+T   +QS +DN T+
Sbjct: 722 TGMAGINGLSSSWHKVLDSTQLRLQSTTDNATD 754


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = -3

Query: 334  YDVRSGIIM*KPA*LVTGNKAPPR**TQHVLLLLYEGKNE 215
            Y +++G++   P   ++GN    R  +QH LL+L+E ++E
Sbjct: 3284 YSLQTGLL--SPDGSLSGNAMGGRSSSQHSLLMLFETQDE 3321


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 558  TRYTLICLIKSTRIYXSICKRI 623
            T+ TL C++K       +C+R+
Sbjct: 1220 TKTTLTCMVKEESFINKLCERV 1241


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 257 LLSGWSFITSYKSSWFS 307
           LL GWS +T+ K  W S
Sbjct: 10  LLLGWSTVTAQKDWWES 26


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 697,589
Number of Sequences: 2352
Number of extensions: 13973
Number of successful extensions: 305
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)