Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0943
         (680 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070805-1|AAL48427.1|  227|Drosophila melanogaster AT19513p pro...    60   3e-09
AF145124-1|AAF07876.1|  227|Drosophila melanogaster ferritin 2 l...    60   3e-09
AE014297-4585|AAN14229.1|  227|Drosophila melanogaster CG1469-PC...    60   3e-09
AE014297-4584|AAN14228.1|  227|Drosophila melanogaster CG1469-PB...    60   3e-09
AE014297-4583|AAF57038.1|  227|Drosophila melanogaster CG1469-PA...    60   3e-09
AF145126-2|AAF07879.1|  227|Drosophila melanogaster ferritin 2 l...    60   4e-09
AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p pro...    31   1.9  
AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA...    31   1.9  

>AY070805-1|AAL48427.1|  227|Drosophila melanogaster AT19513p
           protein.
          Length = 227

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AF145124-1|AAF07876.1|  227|Drosophila melanogaster ferritin 2
           light chain homolog protein.
          Length = 227

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AE014297-4585|AAN14229.1|  227|Drosophila melanogaster CG1469-PC,
           isoform C protein.
          Length = 227

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AE014297-4584|AAN14228.1|  227|Drosophila melanogaster CG1469-PB,
           isoform B protein.
          Length = 227

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AE014297-4583|AAF57038.1|  227|Drosophila melanogaster CG1469-PA,
           isoform A protein.
          Length = 227

 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSANSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AF145126-2|AAF07879.1|  227|Drosophila melanogaster ferritin 2
           light chain homolog protein.
          Length = 227

 Score = 59.7 bits (138), Expect = 4e-09
 Identities = 38/116 (32%), Positives = 54/116 (46%)
 Frame = +2

Query: 263 IVACLALGVLAEEDSCYQNVDQGCRRTLSLPYCSAYYGQFKDNHVVANELKALASLYLKR 442
           + ACL    LA++D   QN       T +    S    +F     +  E+++  +  L +
Sbjct: 9   LFACLGSLALAKDDEYCQNTVITACSTSAFSGNSICNARFAGIDHIEPEIQSYINANLAK 68

Query: 443 SYHYLLSAXYFNNYQTNXEGFXSSSGNYRTIPXEKTXGLIKXVTKRGGKMDFFESH 610
           SY YLL A +FN+YQ N  GF            E +  LIK VT+RGG +DF   H
Sbjct: 69  SYDYLLLATHFNSYQKNRPGFQKLYQGLSDRSFEDSIALIKQVTRRGGIVDFNTRH 124


>AY119190-1|AAM51050.1|  449|Drosophila melanogaster SD11486p
           protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 84  INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 209
           +N   L+L  +  L  ++ +V   +SVC G T+DI+ + L F
Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155


>AE014296-1406|AAF50459.2|  449|Drosophila melanogaster CG7213-PA
           protein.
          Length = 449

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = +3

Query: 84  INYNLLSLCGRFHLDESLLEVAFCASVCKGSTFDIRQTHLLF 209
           +N   L+L  +  L  ++ +V   +SVC G T+DI+ + L F
Sbjct: 114 VNVKCLNLLLQSELQRAISKVKTASSVCSGRTYDIKYSVLTF 155


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,725,908
Number of Sequences: 53049
Number of extensions: 523980
Number of successful extensions: 1153
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)