Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0942
         (672 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052111-1|AAK93535.1|  522|Drosophila melanogaster SD05804p pro...    29   4.4  
AF109308-1|AAD16981.1|  514|Drosophila melanogaster putative G-p...    29   4.4  
AE014296-90|AAF47379.2|  514|Drosophila melanogaster CG6936-PA, ...    29   4.4  
AE014296-89|AAN11440.1|  522|Drosophila melanogaster CG6936-PB, ...    29   4.4  
AY118394-1|AAM48423.1|  875|Drosophila melanogaster RE52162p pro...    29   7.6  
AY071668-1|AAL49290.1|  485|Drosophila melanogaster RH02365p pro...    29   7.6  
AE014296-709|AAF47805.3|  485|Drosophila melanogaster CG14980-PB...    29   7.6  
AE014134-2171|AAF53174.2| 1075|Drosophila melanogaster CG31760-P...    29   7.6  

>AY052111-1|AAK93535.1|  522|Drosophila melanogaster SD05804p
           protein.
          Length = 522

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -1

Query: 273 TFASHVNTVSHRKPGYALAKLIVVNERGKEKAYGPSNGE*LPSIVGTANVVSTIHFYFII 94
           TF  H + V+ RK  Y L  L   +         P N   +PSI G   VV       ++
Sbjct: 172 TFFRHFDRVTLRKREYCLQHLTFADGNATSIRIAPHNCLIVPSITG-QTVVMISSLICMV 230

Query: 93  NTIVFFLLLRWLDEL 49
            TI  +L ++ L  L
Sbjct: 231 LTIAVYLFVKKLQNL 245


>AF109308-1|AAD16981.1|  514|Drosophila melanogaster putative
           G-protein-coupled receptorprotein.
          Length = 514

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -1

Query: 273 TFASHVNTVSHRKPGYALAKLIVVNERGKEKAYGPSNGE*LPSIVGTANVVSTIHFYFII 94
           TF  H + V+ RK  Y L  L   +         P N   +PSI G   VV       ++
Sbjct: 172 TFFRHFDRVTLRKREYCLQHLTFADGNATSIRIAPHNCLIVPSITG-QTVVMISSLICMV 230

Query: 93  NTIVFFLLLRWLDEL 49
            TI  +L ++ L  L
Sbjct: 231 LTIAVYLFVKKLQNL 245


>AE014296-90|AAF47379.2|  514|Drosophila melanogaster CG6936-PA,
           isoform A protein.
          Length = 514

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -1

Query: 273 TFASHVNTVSHRKPGYALAKLIVVNERGKEKAYGPSNGE*LPSIVGTANVVSTIHFYFII 94
           TF  H + V+ RK  Y L  L   +         P N   +PSI G   VV       ++
Sbjct: 172 TFFRHFDRVTLRKREYCLQHLTFADGNATSIRIAPHNCLIVPSITG-QTVVMISSLICMV 230

Query: 93  NTIVFFLLLRWLDEL 49
            TI  +L ++ L  L
Sbjct: 231 LTIAVYLFVKKLQNL 245


>AE014296-89|AAN11440.1|  522|Drosophila melanogaster CG6936-PB,
           isoform B protein.
          Length = 522

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/75 (29%), Positives = 31/75 (41%)
 Frame = -1

Query: 273 TFASHVNTVSHRKPGYALAKLIVVNERGKEKAYGPSNGE*LPSIVGTANVVSTIHFYFII 94
           TF  H + V+ RK  Y L  L   +         P N   +PSI G   VV       ++
Sbjct: 172 TFFRHFDRVTLRKREYCLQHLTFADGNATSIRIAPHNCLIVPSITG-QTVVMISSLICMV 230

Query: 93  NTIVFFLLLRWLDEL 49
            TI  +L ++ L  L
Sbjct: 231 LTIAVYLFVKKLQNL 245


>AY118394-1|AAM48423.1|  875|Drosophila melanogaster RE52162p
           protein.
          Length = 875

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 274 LLTFSFARSYAGGTIMETFPEMTITTVQN 360
           LL  +FA+  A  T + T PE T TTV N
Sbjct: 66  LLLVAFAKHAAAATTIATNPEATTTTVSN 94


>AY071668-1|AAL49290.1|  485|Drosophila melanogaster RH02365p
           protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = +1

Query: 289 FARSYAGGTIMETFPEM--TITTVQNLISCG*FTSNYT*IC-----IKNIFKLSASNRPI 447
           F R+   GT+ ETFP++  +I   Q  + CG   S     C     ++++ K+ AS+  I
Sbjct: 196 FLRAQNFGTLCETFPDIKESIMLYQEQVLCGGKLSPEDLHCVHSYVVQHVLKVEASSSTI 255

Query: 448 AIHSVMNRT 474
           A+   + R+
Sbjct: 256 AVSPSLKRS 264


>AE014296-709|AAF47805.3|  485|Drosophila melanogaster CG14980-PB
           protein.
          Length = 485

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
 Frame = +1

Query: 289 FARSYAGGTIMETFPEM--TITTVQNLISCG*FTSNYT*IC-----IKNIFKLSASNRPI 447
           F R+   GT+ ETFP++  +I   Q  + CG   S     C     ++++ K+ AS+  I
Sbjct: 196 FLRAQNFGTLCETFPDIKESIMLYQEQVLCGGKLSPEDLHCVHSYVVQHVLKVEASSSTI 255

Query: 448 AIHSVMNRT 474
           A+   + R+
Sbjct: 256 AVSPSLKRS 264


>AE014134-2171|AAF53174.2| 1075|Drosophila melanogaster CG31760-PA
           protein.
          Length = 1075

 Score = 28.7 bits (61), Expect = 7.6
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 274 LLTFSFARSYAGGTIMETFPEMTITTVQN 360
           LL  +FA+  A  T + T PE T TTV N
Sbjct: 66  LLLVAFAKHAAAATTIATNPEATTTTVSN 94


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,497,714
Number of Sequences: 53049
Number of extensions: 570375
Number of successful extensions: 1111
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)