Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0942
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astaci...    29   3.0  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    28   6.9  

>U46668-4|AAA93348.3|  951|Caenorhabditis elegans Nematode astacin
           protease protein39 protein.
          Length = 951

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -1

Query: 354 DSCYCHFREGFHYCTTSVGTCE*KCQQTFASHVNTVSHRKPGYALAK 214
           D  + +F   F  C      CE  CQ    S+V T +   PGY LA+
Sbjct: 639 DGFFANFIADFDECQNDNAGCEHTCQNRLGSYVCTCN---PGYILAE 682


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
            protein F26D2.10 protein.
          Length = 1213

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +1

Query: 265  CKRLLTFSFARSYAGGTIMETFP 333
            CK LLT +   +  GG +M+TFP
Sbjct: 1117 CKNLLTLNTLVAAHGGVVMDTFP 1139


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,845,329
Number of Sequences: 27780
Number of extensions: 300823
Number of successful extensions: 611
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 611
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)