Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0929
         (674 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g01110.1 68414.m00014 expressed protein contains Prosite PS00...    28   5.0  
At1g51440.1 68414.m05790 lipase class 3 family protein similar t...    28   6.6  
At2g30550.2 68415.m03721 lipase class 3 family protein similar t...    27   8.7  
At2g30550.1 68415.m03720 lipase class 3 family protein similar t...    27   8.7  
At1g06800.2 68414.m00725 lipase class 3 family protein similar t...    27   8.7  
At1g06800.1 68414.m00724 lipase class 3 family protein similar t...    27   8.7  

>At1g01110.1 68414.m00014 expressed protein contains Prosite
           PS00165: Serine/threonine dehydratases
           pyridoxal-phosphate attachment site
          Length = 364

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
 Frame = -2

Query: 292 PKMRHPP*DISSKSQYSY-NGCPTLQTETHYCFTAEIGRAVVPTRADSQDVLP 137
           P+ +  P +   ++ YSY +  P+L++  +Y FTA  G ++  T  ++  +LP
Sbjct: 212 PRCQRDPREDRDRAAYSYTSNTPSLRS--NYSFTARSGCSISTTMVNNASLLP 262


>At1g51440.1 68414.m05790 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706, lipase [Dianthus caryophyllus] GI:4103627;
           contains Pfam profile PF01764: Lipase
          Length = 527

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
 Frame = +2

Query: 23  GNCK--PFDYPSVLKWVRGYGNPE*RFMYTTSNYNLPNYW 136
           G+CK  P D+   L      G    R++Y TSN NLPN++
Sbjct: 139 GSCKYHPSDFFLNLDLHLHKGYTITRYLYATSNINLPNFF 178


>At2g30550.2 68415.m03721 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 529

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 92  RFMYTTSNYNLPNYW 136
           R++Y TSN NLPN++
Sbjct: 177 RYLYATSNINLPNFF 191


>At2g30550.1 68415.m03720 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 464

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 92  RFMYTTSNYNLPNYW 136
           R++Y TSN NLPN++
Sbjct: 177 RYLYATSNINLPNFF 191


>At1g06800.2 68414.m00725 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 444

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 92  RFMYTTSNYNLPNYW 136
           R++Y TSN NLPN++
Sbjct: 161 RYLYATSNINLPNFF 175


>At1g06800.1 68414.m00724 lipase class 3 family protein similar to
           DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
           GI:16215706; contains Pfam profile PF01764: Lipase
          Length = 515

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = +2

Query: 92  RFMYTTSNYNLPNYW 136
           R++Y TSN NLPN++
Sbjct: 161 RYLYATSNINLPNFF 175


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,135,067
Number of Sequences: 28952
Number of extensions: 291128
Number of successful extensions: 522
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)