Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0927
(431 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 102 3e-21
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 101 9e-21
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 94 1e-18
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 93 2e-18
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 91 7e-18
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 87 2e-16
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 83 2e-15
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 79 4e-14
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 70 2e-11
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 69 4e-11
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 69 6e-11
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 66 2e-10
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 65 5e-10
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 59 3e-08
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 54 1e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 54 1e-06
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 54 1e-06
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 53 3e-06
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 52 7e-06
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 51 9e-06
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 50 2e-05
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 49 4e-05
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 49 4e-05
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 48 8e-05
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 48 1e-04
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 47 2e-04
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 46 3e-04
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 46 4e-04
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 44 0.002
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 42 0.004
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 42 0.007
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 41 0.013
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 40 0.022
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 40 0.030
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 39 0.052
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 38 0.068
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 38 0.068
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 37 0.21
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 37 0.21
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 36 0.28
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 36 0.36
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 36 0.48
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 34 1.1
UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2; Ostreoco... 33 2.6
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 33 2.6
UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1... 33 3.4
UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila pseudoobscu... 33 3.4
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 33 3.4
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 33 3.4
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 33 3.4
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 33 3.4
UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Re... 32 4.5
UniRef50_A4G4I8 Cluster: Putative uncharacterized protein; n=1; ... 32 4.5
UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve; ... 32 4.5
UniRef50_P49425 Cluster: Mannan endo-1,4-beta-mannosidase (EC 3.... 32 4.5
UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A... 32 4.5
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 32 5.9
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 31 7.8
UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep: L... 31 7.8
UniRef50_Q17PQ3 Cluster: Putative uncharacterized protein; n=1; ... 31 7.8
UniRef50_Q6FQ72 Cluster: Similarities with sp|P40095 Saccharomyc... 31 7.8
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 102 bits (245), Expect = 3e-21
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 101 bits (241), Expect = 9e-21
Identities = 50/64 (78%), Positives = 52/64 (81%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 400 NGHI 411
NGH+
Sbjct: 109 NGHV 112
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 93.9 bits (223), Expect = 1e-18
Identities = 47/64 (73%), Positives = 49/64 (76%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 400 NGHI 411
NGH+
Sbjct: 74 NGHV 77
Score = 35.9 bits (79), Expect = 0.36
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 182 VPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
+PVTKLG L+ + KI LE IYLF K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 93.5 bits (222), Expect = 2e-18
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 400 NGHIWFG 420
+GH+ G
Sbjct: 107 DGHVGLG 113
Score = 48.8 bits (111), Expect = 5e-05
Identities = 19/31 (61%), Positives = 26/31 (83%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLF 253
++++ EWVPVTKLGRLV+ GKI +E IYL+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLY 58
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 91.5 bits (217), Expect = 7e-18
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 400 NGH 408
NG+
Sbjct: 62 NGY 64
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 86.6 bits (205), Expect = 2e-16
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Frame = +1
Query: 238 EHLLVF-LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIW 414
EH+ +F LPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHI
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 415 FG 420
G
Sbjct: 129 LG 130
Score = 45.2 bits (102), Expect = 6e-04
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 164 EDQXEWVPVTKLGRLVREGKIDKLESIYLF 253
+D+ WVP TKLGRLV++GKI LE I+LF
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLF 74
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 83.0 bits (196), Expect = 2e-15
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWF 417
E L LP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL 113
Query: 418 G 420
G
Sbjct: 114 G 114
Score = 41.1 bits (92), Expect = 0.010
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +2
Query: 167 DQXEWVPVTKLGRLVREGKIDKLESIYL 250
++ WVPVTKLGRLV+ GKI +E I+L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFL 58
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 79.0 bits (186), Expect = 4e-14
Identities = 40/52 (76%), Positives = 41/52 (78%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 375
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 48.4 bits (110), Expect = 6e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 70.1 bits (164), Expect = 2e-11
Identities = 38/89 (42%), Positives = 49/89 (55%)
Frame = +1
Query: 160 QGRPXRVGSCHQTRPSCSRRKNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 339
QG + P K + + +L LPIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLFS-LPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 340 KQTRAGQRTRFKAFVAIGDNNGHIWFGCE 426
KQ +AG+R RFK V I D N ++ G E
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVE 203
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 68.9 bits (161), Expect = 4e-11
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 375
K + E L LPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 44.4 bits (100), Expect = 0.001
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+P TKLG LV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 68.5 bits (160), Expect = 6e-11
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HI G
Sbjct: 90 IPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLG 143
Score = 43.2 bits (97), Expect = 0.002
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 170 QXEWVPVTKLGRLVREGKIDKLESIYLF 253
+ EWVP+TKLGRLV+ GKI LE+I+ F
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQF 88
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 66.5 bits (155), Expect = 2e-10
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+ G
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIG 101
Score = 35.5 bits (78), Expect = 0.48
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLF 253
++++ EW+P T +GRLV+ KI LE I+ F
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKF 45
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 65.3 bits (152), Expect = 5e-10
Identities = 31/37 (83%), Positives = 31/37 (83%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH G
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLG 84
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 59.3 bits (137), Expect = 3e-08
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWF 417
E L LPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 418 GCE 426
G +
Sbjct: 122 GLD 124
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 54.4 bits (125), Expect = 1e-06
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +1
Query: 259 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFGCE 426
PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ G E
Sbjct: 14 PIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVE 69
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.4 bits (125), Expect = 1e-06
Identities = 27/51 (52%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGH 408
+ IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH
Sbjct: 60 IKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGH 109
Score = 34.3 bits (75), Expect = 1.1
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 185 PVTKLGRLVREGKIDKLESIYLF 253
PVTKLGRLV++GK+ ++ I+ F
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEF 58
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 54.0 bits (124), Expect = 1e-06
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWF 417
LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++ +
Sbjct: 84 LPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGY 136
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 52.8 bits (121), Expect = 3e-06
Identities = 29/53 (54%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Frame = +1
Query: 253 FLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAI--GDNNG 405
+LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I G +NG
Sbjct: 17 YLPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTINYGGHNG 68
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 51.6 bits (118), Expect = 7e-06
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +1
Query: 238 EHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 411
E L LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYV 68
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 51.2 bits (117), Expect = 9e-06
Identities = 24/54 (44%), Positives = 37/54 (68%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWF 417
LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G I +
Sbjct: 33 LPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIGY 85
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 50.4 bits (115), Expect = 2e-05
Identities = 20/55 (36%), Positives = 35/55 (63%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++ G
Sbjct: 31 LPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGVG 84
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 49.2 bits (112), Expect = 4e-05
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ G
Sbjct: 39 LPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIG 92
Score = 31.5 bits (68), Expect = 7.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIY 247
EW P T +G LV+EGKI ++ ++
Sbjct: 12 EWKPRTSIGSLVKEGKISSIKELF 35
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 49.2 bits (112), Expect = 4e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++ G
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVG 95
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 48.0 bits (109), Expect = 8e-05
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2
Query: 170 QXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSLISSSARP 304
+ +W+P+TKLG LV+E KI LE IY F S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 32.7 bits (71), Expect = 3.4
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+ IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+ G
Sbjct: 67 MKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVSLG 123
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 47.6 bits (108), Expect = 1e-04
Identities = 22/50 (44%), Positives = 35/50 (70%)
Frame = -3
Query: 411 NMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFD 262
++ V V +G++ LE L+GT L L HDL++ ++Q A+EEI+DLE F+
Sbjct: 65 DVAVAVTDGDEGLEARTLTGTGLLLDGHDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 46.8 bits (106), Expect = 2e-04
Identities = 26/55 (47%), Positives = 33/55 (60%)
Frame = +1
Query: 256 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
L I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++ G
Sbjct: 72 LRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGIG 125
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 46.4 bits (105), Expect = 3e-04
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLF 253
K + EW+PVTKLGRLV++ KI LE IYLF
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLF 84
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 45.6 bits (103), Expect = 4e-04
Identities = 25/53 (47%), Positives = 32/53 (60%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++ G
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIG 106
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 43.6 bits (98), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFGC 423
GP ++VL++ + K + G+ F+A VA+GD NG I GC
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGC 110
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/43 (44%), Positives = 28/43 (65%)
Frame = +1
Query: 283 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 411
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHV 43
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 41.5 bits (93), Expect = 0.007
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
L + V+ + V K + G+R RF A V +GD NGH+ FG
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFG 50
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 40.7 bits (91), Expect = 0.013
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +1
Query: 301 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+ + V+KI + K T+ G+ RF A V IGD NG + FG
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFG 87
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 39.9 bits (89), Expect = 0.022
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Frame = +1
Query: 262 IKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++ G
Sbjct: 44 IKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLG 99
Score = 34.7 bits (76), Expect = 0.84
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIYLFFYQSK 268
EW P TKLG +V+EG+I + I+ YQ K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 39.5 bits (88), Expect = 0.030
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -3
Query: 411 NMTVVVANGNKCLETCALSGTCLFLYRHDLKNLIIQGRAEEEINDLEFFDW 259
++TV V N + LE+ +L+ + L L R D+ N I+Q ++ +NDLEF DW
Sbjct: 146 DVTVGVTNDDDSLESGSLTSSGLLLDRLDVHNFILQVW-QQLVNDLEFLDW 195
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 38.7 bits (86), Expect = 0.052
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 179 WVPVTKLGRLVREGKIDKLESIYLF 253
W PVTKLGRLV++GK+ ++ I+ F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEF 59
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 38.3 bits (85), Expect = 0.068
Identities = 25/49 (51%), Positives = 29/49 (59%)
Frame = +1
Query: 265 KEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHI 411
K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+
Sbjct: 88 KKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHV 132
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 38.3 bits (85), Expect = 0.068
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 337 QKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
QKQT+ GQ+ R K F GD NGH+ G
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLG 28
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 36.7 bits (81), Expect = 0.21
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEF-----EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFV 384
KN Q +L +L +K ++++ G SL +V++ + V + T++G++ + K V
Sbjct: 75 KNFQINLKILDYLFLKRIFFHNNKLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAV 134
Query: 385 AIGDNNGHIWFG 420
+GD +GH+ G
Sbjct: 135 LVGDLDGHVGLG 146
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 36.7 bits (81), Expect = 0.21
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESI 244
EW P TKLGRLV+EGKI ++ I
Sbjct: 6 EWQPKTKLGRLVKEGKITNIDEI 28
Score = 32.7 bits (71), Expect = 3.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 337 QKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
QK+T G +TR++ +GD +GH+ G
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVG 99
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 36.3 bits (80), Expect = 0.28
Identities = 20/41 (48%), Positives = 23/41 (56%)
Frame = +1
Query: 259 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAF 381
P +II+FFLG L DEVL+ M Q QRTR K F
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVF 81
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 35.9 bits (79), Expect = 0.36
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+ ++KI V K T+ G++ F+A V IGD NG + G
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVG 64
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 35.5 bits (78), Expect = 0.48
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFGC 423
+ V+++ V K + G++ +F+A V +GD G++ GC
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGC 186
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 34.3 bits (75), Expect = 1.1
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
G L ++++ I V K + G+R F A V +GD G + FG
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFG 97
>UniRef50_Q01BF6 Cluster: COG0457: FOG: TPR repeat; n=2;
Ostreococcus|Rep: COG0457: FOG: TPR repeat - Ostreococcus
tauri
Length = 1474
Score = 33.1 bits (72), Expect = 2.6
Identities = 13/37 (35%), Positives = 25/37 (67%), Gaps = 4/37 (10%)
Frame = -3
Query: 375 LETCALSGTCLFLYRHDLKNLI----IQGRAEEEIND 277
LE+CAL TC+ +Y HD+ ++ + +A+E+++D
Sbjct: 965 LESCALDDTCVIVYEHDMNRVMLCRTLVSKAKEKLSD 1001
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 33.1 bits (72), Expect = 2.6
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
L ++++ I V K + G+R F A V +GD NG + +G
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYG 54
>UniRef50_Q1III4 Cluster: Molybdenum cofactor synthesis-like; n=1;
Acidobacteria bacterium Ellin345|Rep: Molybdenum
cofactor synthesis-like - Acidobacteria bacterium
(strain Ellin345)
Length = 338
Score = 32.7 bits (71), Expect = 3.4
Identities = 15/26 (57%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Frame = -3
Query: 351 TCLFLYR-HDLKNLIIQGRAEEEIND 277
TCLF R HDL +LI++G ++EEI D
Sbjct: 281 TCLFSVREHDLASLILEGASDEEIAD 306
>UniRef50_Q29F16 Cluster: GA16916-PA; n=1; Drosophila
pseudoobscura|Rep: GA16916-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 391
Score = 32.7 bits (71), Expect = 3.4
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = -1
Query: 188 QEPTLSGLPCRAHDHGRDHDRVHE-DRHGLYLHRV-----IRIRRENRHVHRLEQRPPL 30
+EPT S CR+ GR H R G HR+ IR R HRL + PP+
Sbjct: 146 REPTRSPSRCRSRQSGRSHQHPQRRSRSGTRQHRLSREPPIRHSRSISRQHRLSREPPV 204
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 32.7 bits (71), Expect = 3.4
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
D+++ I V K + G+R F A V +GD G + FG
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFG 60
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 32.7 bits (71), Expect = 3.4
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+ V++I V K + G++ F+A + +GD NG + G
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVG 104
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 32.7 bits (71), Expect = 3.4
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 310 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
+++LKI V K T+ G+ F A+GD G I G
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLG 47
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 32.7 bits (71), Expect = 3.4
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +1
Query: 295 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
G L D V+ I V K + G+ F A V +GD NG + G
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVG 83
>UniRef50_Q12FM3 Cluster: Phage integrase; n=2; Proteobacteria|Rep:
Phage integrase - Polaromonas sp. (strain JS666 / ATCC
BAA-500)
Length = 311
Score = 32.3 bits (70), Expect = 4.5
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 158 RAHDHGRDHDRVHEDRHGLYLHRVIRIRRENRHVHRL 48
R HD GR R+H+ RH + R++R RE V RL
Sbjct: 230 RRHDGGRYQPRLHDLRHTAAVTRLVRWYREGVDVQRL 266
>UniRef50_A4G4I8 Cluster: Putative uncharacterized protein; n=1;
Herminiimonas arsenicoxydans|Rep: Putative
uncharacterized protein - Herminiimonas arsenicoxydans
Length = 891
Score = 32.3 bits (70), Expect = 4.5
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +1
Query: 226 RQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLK 324
RQ+++H L++L + +F+I++ G S DE+L+
Sbjct: 487 RQSKQHALLYLDLDQFKIVNDTCGHSAGDELLR 519
>UniRef50_Q4WLB1 Cluster: CDF zinc transporter (Msc2), putaitve;
n=7; Eurotiomycetidae|Rep: CDF zinc transporter (Msc2),
putaitve - Aspergillus fumigatus (Sartorya fumigata)
Length = 877
Score = 32.3 bits (70), Expect = 4.5
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 152 HDHGRDHDRVHEDRHGLYLH 93
HDHG H +E+ HG++LH
Sbjct: 649 HDHGHSHSHGNENMHGIFLH 668
>UniRef50_P49425 Cluster: Mannan endo-1,4-beta-mannosidase (EC
3.2.1.78) (Endo-(1,4)-beta- mannanase); n=1;
Rhodothermus marinus|Rep: Mannan
endo-1,4-beta-mannosidase (EC 3.2.1.78)
(Endo-(1,4)-beta- mannanase) - Rhodothermus marinus
(Rhodothermus obamensis)
Length = 1021
Score = 32.3 bits (70), Expect = 4.5
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = -1
Query: 311 SFRDGPRKKSMISNSLIGKKTSKCSRVCRFFLRE-----QDGRVW*QEPTLSGLPC---R 156
+FRDGPR+ +++ ++G++ R+ + R + GR L G+ C R
Sbjct: 245 AFRDGPRRPVGVASPVLGQRPCPGHRIVQNLFRHGIDPCRVGRCRRSPSELHGMGCADVR 304
Query: 155 AHDHGRDHDRVHEDRH 108
A HGR H R D H
Sbjct: 305 ARGHGR-HMRGQRDEH 319
>UniRef50_Q9NQ11 Cluster: Probable cation-transporting ATPase 13A2;
n=23; Euteleostomi|Rep: Probable cation-transporting
ATPase 13A2 - Homo sapiens (Human)
Length = 1180
Score = 32.3 bits (70), Expect = 4.5
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 236 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 31.9 bits (69), Expect = 5.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 304 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFG 420
L + ++ + T+ G+R F V +GD GH+ FG
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFG 66
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 31.5 bits (68), Expect = 7.8
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 283 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIWFGCE 426
DF G + + ++++ V K + G+ F+ IG+ NG + GC+
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQ 553
>UniRef50_Q53I53 Cluster: Legumin-like; n=1; Lupinus albus|Rep:
Legumin-like - Lupinus albus (White lupin)
Length = 265
Score = 31.5 bits (68), Expect = 7.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 158 RAHDHGRDHDRVHEDRHGLYLHRVIRIRRENRHVHRLEQR 39
R H H H+ E+ + H+V R+RR +RH H + R
Sbjct: 113 RRHPHHHHHEEEEEEEEE-WSHQVRRVRRPHRHHHHRKDR 151
>UniRef50_Q17PQ3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 282
Score = 31.5 bits (68), Expect = 7.8
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 163 GRPXRVGSCHQTRPSCSRRKNRQTREHLLV 252
GRP + SCH+T + Q REHLL+
Sbjct: 118 GRPFKCDSCHKTYCRKDNLRQHQEREHLLI 147
>UniRef50_Q6FQ72 Cluster: Similarities with sp|P40095 Saccharomyces
cerevisiae YER158c; n=1; Candida glabrata|Rep:
Similarities with sp|P40095 Saccharomyces cerevisiae
YER158c - Candida glabrata (Yeast) (Torulopsis glabrata)
Length = 517
Score = 31.5 bits (68), Expect = 7.8
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = -1
Query: 179 TLSGLPCRAHDHGRDHDRVHEDRHGLYLHRVIRIRRENRHVHRLEQ 42
T S + D GR+H R HE H R + R + HV+R Q
Sbjct: 157 TASNIGKTYSDRGREHGREHEREHERERDRQHELSRRHSHVYRAPQ 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,544,276
Number of Sequences: 1657284
Number of extensions: 6793576
Number of successful extensions: 22441
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 20613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22192
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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