Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0927
(431 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17206-1|CAA35078.1| 221|Homo sapiens protein ( Human mRNA for ... 102 5e-22
BC106060-1|AAI06061.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC105985-1|AAI05986.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC103756-1|AAI03757.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC075830-1|AAH75830.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC073966-1|AAH73966.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC071924-1|AAH71924.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC071923-1|AAH71923.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC071922-1|AAH71922.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC071673-1|AAH71673.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC068051-1|AAH68051.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC066321-1|AAH66321.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC032129-1|AAH32129.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC025677-1|AAH25677.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC023541-1|AAH23541.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC021545-1|AAH21545.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC018993-1|AAH18993.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC016951-1|AAH16951.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC016178-1|AAH16178.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC012354-1|AAH12354.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC010165-1|AAH10165.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC008862-1|AAH08862.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC006559-1|AAH06559.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC001795-1|AAH01795.1| 293|Homo sapiens ribosomal protein S2 pr... 102 5e-22
AB082925-1|BAC16801.1| 233|Homo sapiens ribosomal protein S2 pr... 102 5e-22
AB065089-1|BAB93526.1| 203|Homo sapiens ribosomal protein S2 pr... 102 5e-22
BC026177-1|AAH26177.1| 172|Homo sapiens MGC27348 protein protein. 91 1e-18
BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein. 35 0.10
AY461712-1|AAR23423.1| 1175|Homo sapiens putative N-ATPase protein. 35 0.10
AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein. 35 0.10
BC034575-1|AAH34575.1| 1088|Homo sapiens ATP13A2 protein protein. 32 0.73
AL354615-1|CAB89728.1| 1180|Homo sapiens hypothetical protein pr... 32 0.73
AL049569-6|CAI20366.1| 1180|Homo sapiens ATPase type 13A2 protein. 32 0.73
AL157766-1|CAI13922.2| 4432|Homo sapiens spastic ataxia of Charl... 29 6.8
AF193556-1|AAF31262.1| 3829|Homo sapiens sacsin protein. 29 6.8
BC052251-1|AAH52251.1| 1499|Homo sapiens ATPase, Class V, type 1... 29 9.0
AY029504-1|AAK33100.1| 1499|Homo sapiens aminophospholipid-trans... 29 9.0
AB051358-1|BAB47392.1| 1499|Homo sapiens putative aminophospholi... 29 9.0
AB011138-1|BAA25492.1| 1163|Homo sapiens KIAA0566 protein protein. 29 9.0
>X17206-1|CAA35078.1| 221|Homo sapiens protein ( Human mRNA for
LLRep3. ).
Length = 221
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 61
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 62 NGHVGLG 68
>BC106060-1|AAI06061.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC105985-1|AAI05986.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC103756-1|AAI03757.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC075830-1|AAH75830.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC073966-1|AAH73966.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC071924-1|AAH71924.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC071923-1|AAH71923.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC071922-1|AAH71922.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC071673-1|AAH71673.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC068051-1|AAH68051.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC066321-1|AAH66321.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC032129-1|AAH32129.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC025677-1|AAH25677.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC023541-1|AAH23541.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC021545-1|AAH21545.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC018993-1|AAH18993.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC016951-1|AAH16951.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC016178-1|AAH16178.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC012354-1|AAH12354.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC010165-1|AAH10165.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC008862-1|AAH08862.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC006559-1|AAH06559.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC001795-1|AAH01795.1| 293|Homo sapiens ribosomal protein S2
protein.
Length = 293
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>AB082925-1|BAC16801.1| 233|Homo sapiens ribosomal protein S2
protein.
Length = 233
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 73
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 74 NGHVGLG 80
Score = 39.1 bits (87), Expect = 0.006
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 182 VPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 1 MPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 31
>AB065089-1|BAB93526.1| 203|Homo sapiens ribosomal protein S2
protein.
Length = 203
Score = 102 bits (245), Expect = 5e-22
Identities = 51/67 (76%), Positives = 53/67 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 400 NGHIWFG 420
NGH+ G
Sbjct: 134 NGHVGLG 140
Score = 47.6 bits (108), Expect = 2e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 161 KEDQXEWVPVTKLGRLVREGKIDKLESIYLFFYQSKNS 274
K + EW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>BC026177-1|AAH26177.1| 172|Homo sapiens MGC27348 protein protein.
Length = 172
Score = 91.5 bits (217), Expect = 1e-18
Identities = 46/63 (73%), Positives = 50/63 (79%)
Frame = +1
Query: 220 KNRQTREHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 399
K + E L LPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 400 NGH 408
NG+
Sbjct: 62 NGY 64
>BC030267-1|AAH30267.1| 1158|Homo sapiens ATP13A2 protein protein.
Length = 1158
Score = 35.1 bits (77), Expect = 0.10
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 254 KTSKCSRVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
K+ + RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 150 KSEEAKRVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 201
>AY461712-1|AAR23423.1| 1175|Homo sapiens putative N-ATPase protein.
Length = 1175
Score = 35.1 bits (77), Expect = 0.10
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 254 KTSKCSRVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
K+ + RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 150 KSEEAKRVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 201
>AL049569-7|CAI20367.1| 1158|Homo sapiens ATPase type 13A2 protein.
Length = 1158
Score = 35.1 bits (77), Expect = 0.10
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 254 KTSKCSRVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
K+ + RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 150 KSEEAKRVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 201
>BC034575-1|AAH34575.1| 1088|Homo sapiens ATP13A2 protein protein.
Length = 1088
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 236 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 69 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 114
>AL354615-1|CAB89728.1| 1180|Homo sapiens hypothetical protein
protein.
Length = 1180
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 236 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>AL049569-6|CAI20366.1| 1180|Homo sapiens ATPase type 13A2 protein.
Length = 1180
Score = 32.3 bits (70), Expect = 0.73
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 236 RVCRFFLREQDGRVW*QEPTLSGLPCRAHDHGRDHDRVHEDRHGLYL 96
RV R++L + +W E + DHGR D VH RHGL L
Sbjct: 161 RVLRYYLFQGQRYIW-IETQQAFYQVSLLDHGRSCDDVHRSRHGLSL 206
>AL157766-1|CAI13922.2| 4432|Homo sapiens spastic ataxia of
Charlevoix-Saguenay (sacsin) protein.
Length = 4432
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSLISSSARP*MMRFLRSCLYRNKHVP 355
++V +T+LG ++ G++DK+ L F + + +R M+ F + + +KH+
Sbjct: 1387 DFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIK 1446
Query: 356 DSAH 367
D ++
Sbjct: 1447 DKSN 1450
>AF193556-1|AAF31262.1| 3829|Homo sapiens sacsin protein.
Length = 3829
Score = 29.1 bits (62), Expect = 6.8
Identities = 15/64 (23%), Positives = 34/64 (53%)
Frame = +2
Query: 176 EWVPVTKLGRLVREGKIDKLESIYLFFYQSKNSRSLISSSARP*MMRFLRSCLYRNKHVP 355
++V +T+LG ++ G++DK+ L F + + +R M+ F + + +KH+
Sbjct: 784 DFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIK 843
Query: 356 DSAH 367
D ++
Sbjct: 844 DKSN 847
>BC052251-1|AAH52251.1| 1499|Homo sapiens ATPase, Class V, type 10A
protein.
Length = 1499
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 235 REHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKA 378
+EHLL L + ++ DFF+ ++ + V+ P Q +T+ R K+
Sbjct: 554 QEHLLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRTKVRVRFELKS 601
>AY029504-1|AAK33100.1| 1499|Homo sapiens
aminophospholipid-transporting ATPase protein.
Length = 1499
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 235 REHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKA 378
+EHLL L + ++ DFF+ ++ + V+ P Q +T+ R K+
Sbjct: 554 QEHLLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRTKVRVRFELKS 601
>AB051358-1|BAB47392.1| 1499|Homo sapiens putative aminophospholipid
translocase protein.
Length = 1499
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 235 REHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKA 378
+EHLL L + ++ DFF+ ++ + V+ P Q +T+ R K+
Sbjct: 554 QEHLLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRTKVRVRFELKS 601
>AB011138-1|BAA25492.1| 1163|Homo sapiens KIAA0566 protein protein.
Length = 1163
Score = 28.7 bits (61), Expect = 9.0
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 235 REHLLVFLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKA 378
+EHLL L + ++ DFF+ ++ + V+ P Q +T+ R K+
Sbjct: 218 QEHLLAHLSPELSDVFDFFIALTICNTVVVTSPDQPRTKVRVRFELKS 265
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,340,136
Number of Sequences: 237096
Number of extensions: 1092573
Number of successful extensions: 2254
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2247
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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