Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0927
(431 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 1.1
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 1.1
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 1.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 3.4
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 21 4.5
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 21 4.5
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 21 4.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 21 4.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 4.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 4.5
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 4.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 4.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 4.5
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 21 4.5
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 21 7.8
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 21 7.8
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 7.8
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 7.8
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 1.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 427 LHTQTKYDRCCRQW 386
LH Q + CCR W
Sbjct: 391 LHMQPRKKNCCRSW 404
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.4 bits (48), Expect = 1.1
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 427 LHTQTKYDRCCRQW 386
LH Q + CCR W
Sbjct: 391 LHMQPRKKNCCRSW 404
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +1
Query: 244 LLVFLPIKEFEIIDFFLGP 300
+ VFL + EF +++ ++GP
Sbjct: 285 VFVFLSLMEFAVVNNYMGP 303
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.8 bits (44), Expect = 3.4
Identities = 10/20 (50%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
Frame = +1
Query: 184 SCHQTRP-SCSRRKNRQTRE 240
S H +R SCSR +NR+ +E
Sbjct: 228 SSHYSRERSCSRDRNREYKE 247
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 161 CRAHDHGRDHDRVHEDRHGL 102
CR HD D E +HGL
Sbjct: 59 CRTHDMCPDVMSAGESKHGL 78
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 21.4 bits (43), Expect = 4.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 216 KEKSTNSRAFTCFFTNQRIRDH*FLPRPV 302
KEK R +C +R + FL RP+
Sbjct: 1 KEKHLTQRINSCDLLKKRNENDPFLKRPI 29
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 161 CRAHDHGRDHDRVHEDRHGL 102
CR HD D E +HGL
Sbjct: 64 CRTHDMCPDVMSAGESKHGL 83
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 3 SCSRDRNREYRE 14
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 4.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 205 SCSRRKNRQTRE 240
SCSR +NR+ RE
Sbjct: 236 SCSRDRNREYRE 247
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 21.4 bits (43), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = -1
Query: 161 CRAHDHGRDHDRVHEDRHGL 102
CR HD D E +HGL
Sbjct: 64 CRTHDMCPDVMSAGESKHGL 83
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 220 KNRQTREHLLV 252
KN QTREH L+
Sbjct: 129 KNGQTREHALL 139
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 220 KNRQTREHLLV 252
KN QTREH L+
Sbjct: 56 KNGQTREHALL 66
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 220 KNRQTREHLLV 252
KN QTREH L+
Sbjct: 72 KNGQTREHALL 82
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 7.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1
Query: 220 KNRQTREHLLV 252
KN QTREH L+
Sbjct: 129 KNGQTREHALL 139
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,245
Number of Sequences: 438
Number of extensions: 2153
Number of successful extensions: 51
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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