Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0926
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    27   0.41 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   1.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   2.2  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.9  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   3.8  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   3.8  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   3.8  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   5.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.0  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.8  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 27.5 bits (58), Expect = 0.41
 Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +2

Query: 167 TTEIEHRCD-CGQLFSSAALLSRHTTLAHTP 256
           T +  ++CD C Q F    LL RH    H P
Sbjct: 378 TDQKPYKCDQCAQTFRQKQLLKRHMNYYHNP 408


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
 Frame = +1

Query: 301 KPAPKQTRKSTERPKQ-----PVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKS 465
           +P+P   R  T   K      P     S +   +T PT+P        +   +PP    +
Sbjct: 374 EPSPVLLRSPTPAKKPLISVAPASKLLSKSLQPSTLPTRPSPKSSRKRRTGHRPPAGMNA 433

Query: 466 LKSSDKLETSKQTTE 510
             SS K  T+    E
Sbjct: 434 SMSSGKRSTATHQAE 448



 Score = 24.2 bits (50), Expect = 3.8
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +1

Query: 292 IDTKPAPKQTRKSTERPKQPVG---SRKSSTRSDTT 390
           + T+P+PK +RK     + P G   S  S  RS  T
Sbjct: 409 LPTRPSPKSSRKRRTGHRPPAGMNASMSSGKRSTAT 444


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 455 PGSHSNPLTNSKLPNKRQSQGEKEHRPQRRPVPEKMRKLMQKSK 586
           P S ++  +  +   + Q Q + +H+P   P+P +  K   KSK
Sbjct: 463 PDSGTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSK 506


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 25.0 bits (52), Expect = 2.2
 Identities = 12/44 (27%), Positives = 22/44 (50%)
 Frame = +2

Query: 455 PGSHSNPLTNSKLPNKRQSQGEKEHRPQRRPVPEKMRKLMQKSK 586
           P S ++  +  +   + Q Q + +H+P   P+P +  K   KSK
Sbjct: 463 PDSGTDRHSEKQQQQQSQHQQQHQHQPGGGPLPAQSAKQRTKSK 506


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +2

Query: 77  SSVAKRKSSGRPTISSHKTNPSPAKQLKKRTTEIEHR 187
           SS +   SS      +     SPA+Q KK+  E+E R
Sbjct: 380 SSSSSDSSSSSSEEEAENFKISPAEQYKKQAKEVERR 416


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 11/30 (36%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
 Frame = +2

Query: 413 PESPASNSTLNLQKPGSHSN-PLTNSKLPN 499
           P  P     +N Q PG  S+ P++ ++LPN
Sbjct: 634 PTDPVDMRRINFQTPGMISHPPISIAELPN 663


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = +1

Query: 427 VKLDVKPPEARKSLKSSDKLETSKQTT------ESRRKGTPXTEASRARENEETHA 576
           VK ++K   ARK  KSS+  E  ++++      + R+K  P  +++ A   ++  +
Sbjct: 5   VKRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARS 60


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = +1

Query: 427 VKLDVKPPEARKSLKSSDKLETSKQTT------ESRRKGTPXTEASRARENEETHA 576
           VK ++K   ARK  KSS+  E  ++++      + R+K  P  +++ A   ++  +
Sbjct: 5   VKRNIKNKGARKRQKSSESDEAEEESSSVVVVQDRRKKANPNVQSTSALRKKQARS 60


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 588 DFDFCMSFLIFSGTGRLCGRCSFSP*LCRLFGS 490
           DF FC +F  +     L G CS     C  FG+
Sbjct: 227 DFQFCHTFAYYHIIAMLNGFCSLWFVNCTAFGT 259


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 507 RVKAKRNTXHRGVPCPRK*GNSCKNRNHNG 596
           R ++ RNT H  VP P     S    NH G
Sbjct: 663 RNRSARNTNHSIVPPPNANNLSYAETNHKG 692


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 629 MADPIHFRRCTPSREC 676
           +A P+H   CTP R C
Sbjct: 190 LAGPLHGAGCTPERLC 205


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 14/65 (21%), Positives = 27/65 (41%)
 Frame = +1

Query: 301  KPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSD 480
            +P P     S  +P+Q   S++   +       Q +  ++   +   +PP  +  L+ S 
Sbjct: 1280 QPLPLPGLASEMQPQQLHRSQQQQQQQQQQQQQQQQQQQQQQQQQQHQPPSTQAQLRPSA 1339

Query: 481  KLETS 495
             L TS
Sbjct: 1340 PLNTS 1344


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,973
Number of Sequences: 2352
Number of extensions: 13984
Number of successful extensions: 44
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)