BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0926 (676 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 6.1 AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.1 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 21.8 bits (44), Expect = 6.1 Identities = 12/37 (32%), Positives = 14/37 (37%) Frame = +1 Query: 304 PAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTT 414 P P + RP P S S + TT T TT Sbjct: 81 PVPGNLEQIGSRPLHPPASSTSLPATITTTTTTTTTT 117 >AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein protein. Length = 1308 Score = 21.4 bits (43), Expect = 8.1 Identities = 11/40 (27%), Positives = 18/40 (45%) Frame = +1 Query: 310 PKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSV 429 PK+ RK+ + + SRK +S+ T + SV Sbjct: 791 PKKERKTATTTQPVISSRKEQKKSEEKNINDHCVTTEQSV 830 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 174,953 Number of Sequences: 438 Number of extensions: 3771 Number of successful extensions: 8 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20464920 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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