Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0926
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 36 0.019
At3g02930.1 68416.m00288 expressed protein ; expression support... 36 0.019
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 36 0.025
At5g42520.1 68418.m05176 expressed protein 34 0.100
At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product... 33 0.13
At3g09710.1 68416.m01150 calmodulin-binding family protein low s... 33 0.17
At2g35670.1 68415.m04375 transcription factor, putative / fertil... 32 0.30
At2g03800.1 68415.m00339 expressed protein 32 0.40
At2g18050.2 68415.m02099 histone H1-3 (HIS1-3) similar to histon... 31 0.70
At2g18050.1 68415.m02098 histone H1-3 (HIS1-3) similar to histon... 31 0.70
At4g19590.1 68417.m02879 DNAJ heat shock N-terminal domain-conta... 31 0.93
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 31 0.93
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.93
At2g37100.1 68415.m04552 protamine P1 family protein contains Pf... 30 1.2
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 30 1.2
At5g09400.1 68418.m01089 potassium transporter family protein si... 30 1.6
At2g30620.1 68415.m03731 histone H1.2 nearly identical to SP|P26... 30 1.6
At2g30575.1 68415.m03725 glycosyl transferase family 8 protein c... 30 1.6
At2g28440.1 68415.m03455 proline-rich family protein contains pr... 30 1.6
At1g61100.1 68414.m06883 disease resistance protein (TIR class),... 30 1.6
At3g08670.1 68416.m01007 expressed protein 29 2.1
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 29 2.1
At1g74160.1 68414.m08589 expressed protein 29 2.1
At1g70950.1 68414.m08185 expressed protein 29 2.1
At3g54320.1 68416.m06003 ovule development protein, putative sim... 29 2.8
At1g73960.1 68414.m08565 expressed protein similar to TATA bindi... 29 2.8
At1g23790.1 68414.m03001 expressed protein 29 2.8
At1g04450.1 68414.m00437 p21-rho-binding domain-containing prote... 29 2.8
At2g18110.1 68415.m02105 elongation factor 1-beta, putative / EF... 29 3.8
At1g78920.1 68414.m09201 vacuolar-type H+-translocating inorgani... 29 3.8
At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta id... 29 3.8
At5g46750.1 68418.m05759 human Rev interacting-like family prote... 28 5.0
At5g27120.1 68418.m03237 SAR DNA-binding protein, putative stron... 28 5.0
At5g24280.1 68418.m02856 expressed protein ; expression supporte... 28 5.0
At4g39840.1 68417.m05645 expressed protein 28 5.0
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 5.0
At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family... 28 5.0
At2g01100.3 68415.m00018 expressed protein 28 5.0
At2g01100.2 68415.m00017 expressed protein 28 5.0
At2g01100.1 68415.m00016 expressed protein 28 5.0
At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate syntha... 28 5.0
At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containi... 28 5.0
At1g33060.2 68414.m04076 no apical meristem (NAM) family protein... 28 5.0
At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family ... 28 5.0
At1g15940.1 68414.m01913 expressed protein similar To androgen-i... 28 5.0
At1g01300.1 68414.m00046 aspartyl protease family protein contai... 28 5.0
At5g63550.1 68418.m07976 expressed protein 28 6.6
At5g40340.1 68418.m04894 PWWP domain-containing protein KED, Nic... 28 6.6
At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2 (e... 28 6.6
At4g25540.1 68417.m03682 DNA mismatch repair protein MSH3 (MSH3)... 28 6.6
At3g11760.1 68416.m01443 expressed protein 28 6.6
At3g05330.1 68416.m00581 cyclin family low similarity to microtu... 28 6.6
At3g03790.2 68416.m00389 ankyrin repeat family protein / regulat... 28 6.6
At3g03790.1 68416.m00388 ankyrin repeat family protein / regulat... 28 6.6
At2g33620.3 68415.m04122 DNA-binding family protein / AT-hook pr... 28 6.6
At2g33620.2 68415.m04121 DNA-binding family protein / AT-hook pr... 28 6.6
At2g33620.1 68415.m04120 DNA-binding family protein / AT-hook pr... 28 6.6
At1g32810.1 68414.m04044 expressed protein 28 6.6
At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar... 28 6.6
At1g16720.1 68414.m02005 expressed protein 28 6.6
At5g41780.1 68418.m05087 myosin heavy chain-related weak similar... 27 8.7
At3g53760.1 68416.m05939 tubulin family protein similar to SP|Q9... 27 8.7
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 27 8.7
At2g37070.1 68415.m04549 expressed protein 27 8.7
At2g07360.1 68415.m00843 SH3 domain-containing protein contains ... 27 8.7
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 27 8.7
At1g31460.1 68414.m03852 expressed protein 27 8.7
At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein ... 27 8.7
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 36.3 bits (80), Expect = 0.019
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +1
Query: 295 DTKP-APKQTRKSTERPK-QPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVK--PPEARK 462
+ KP +PKQ TE+PK +P ++ S + + P QPK +S + K PP+ +
Sbjct: 462 EPKPESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEE 521
Query: 463 SLKSSDKLETSKQTTESRRKGTPXTEAS 546
S K + ++ TP E S
Sbjct: 522 SPKPEPPKPEESPKPQPPKQETPKPEES 549
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +1
Query: 304 PAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVK-LDVKPPEARKSLKSSD 480
P P+Q + E PKQ ++ ++ P PK + + P+ +S K
Sbjct: 495 PKPEQPKPKPESPKQESSKQEPPKPEESPKPEPPKPEESPKPQPPKQETPKPEESPKPQP 554
Query: 481 KLETSKQTTESRRKGTPXTEASRAREN 561
+ + + ES + P E + E+
Sbjct: 555 PKQETPKPEESPKPQPPKQETPKPEES 581
>At3g02930.1 68416.m00288 expressed protein ; expression supported
by MPSS
Length = 806
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Frame = +1
Query: 304 PAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEA---RKSLKS 474
P +Q+R S ERP S+ S+ + APT P+ T+ +V++ P++ ++ LK
Sbjct: 41 PTQQQSRLSFERPSS--NSKPSTDKRSPKAPTPPEKTQIRAVRVSESQPQSVQIKEDLKK 98
Query: 475 SDKLETSKQTTESRRKGTPXTEASRARENEETHAKIE 585
+++L S + + K + +R +E EE K++
Sbjct: 99 ANELIASLE--NEKAKALDQLKEAR-KEAEEASEKLD 132
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 35.9 bits (79), Expect = 0.025
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Frame = +1
Query: 319 TRKSTER--PKQPVGSRKSSTRSDTTAPTQ-PKTT-RKSSVKLDVKPPEARKSLKSSDKL 486
++ S ER PK P KS R T+ P+TT R S +K D+K R S DK
Sbjct: 63 SKSSVERRSPKLPTPPEKSQARVAAVKGTESPQTTTRLSQIKEDLKKANERISSLEKDKA 122
Query: 487 ETSKQTTESRRKGTPXT----EASRARENEETHAKIE 585
+ + +++++ T +A +A+++ E +++IE
Sbjct: 123 KALDELKQAKKEAEQVTLKLDDALKAQKHVEENSEIE 159
>At5g42520.1 68418.m05176 expressed protein
Length = 342
Score = 33.9 bits (74), Expect = 0.100
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +2
Query: 392 LRPNLKLPESPASNSTLNLQKP--GSHSNP-LTNSKLPNKRQSQGEKEHRPQRRPVPEKM 562
+ PN LP SP + STL KP G NP T NKR G K R ++ + +
Sbjct: 145 MEPNDGLPTSPPAGSTLESAKPKRGKRVNPKATTQTAANKR---GPKNQRKVKKESEDDL 201
Query: 563 RKLM 574
K+M
Sbjct: 202 NKIM 205
>At2g20960.1 68415.m02479 expressed protein pEARLI 4 gene product
[Arabidopsis thaliana] GI:871782
Length = 748
Score = 33.5 bits (73), Expect = 0.13
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 292 IDTKPAPKQTRKSTE--RPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKS 465
++T+P + R +T RP+ P+ ++ R T T+P+T D +P R
Sbjct: 184 LETRPRTPERRSNTSDTRPRTPIHESAATGRRPQTPETRPRTPDHRYATYDNRP---RTP 240
Query: 466 LKSSDKLETSKQTTESRRKGTP 531
+ S E QT E+R + TP
Sbjct: 241 IHESAATERRPQTPETRPR-TP 261
Score = 32.3 bits (70), Expect = 0.30
Identities = 26/92 (28%), Positives = 38/92 (41%), Gaps = 2/92 (2%)
Frame = +1
Query: 295 DTKPAPKQTRKST--ERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSL 468
+T+P R +T RP+ P+ ++ R T T+P+T S D +P R +
Sbjct: 220 ETRPRTPDHRYATYDNRPRTPIHESAATERRPQTPETRPRTPEHRSAIPDTRP---RTPI 276
Query: 469 KSSDKLETSKQTTESRRKGTPXTEASRARENE 564
S QT E+R P T R R E
Sbjct: 277 HESAATGRRPQTPETR----PRTAQRRGRSPE 304
>At3g09710.1 68416.m01150 calmodulin-binding family protein low
similarity to SF16 protein [Helianthus annuus]
GI:560150; contains Pfam profile PF00612: IQ
calmodulin-binding motif
Length = 454
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 322 RKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQ 501
+ ST R Q + KSS R+ + T+P T SS + P ++ + SS K ++S
Sbjct: 290 KNSTNRNSQGGETAKSSNRNKLNSSTKPNTPSASSTA--TRNPRKKRPIPSSIKSKSSDD 347
Query: 502 TTESRRKGTPXTEASRARENEET 570
+S + + A + ++ET
Sbjct: 348 EAKSSERNRRPSIARPSVSDDET 370
>At2g35670.1 68415.m04375 transcription factor, putative /
fertilization-independent seed 2 protein (FIS2)
identical to GB:AF096095
Length = 632
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/86 (23%), Positives = 37/86 (43%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLET 492
K TRK+ + P +R S SD TQP S K+ + ++ S+ + +
Sbjct: 357 KSTRKNVDNVPSPPKTRSSKKTSDILTTTQPTIAESSEPKVRHVNDD---NVSSTPRAHS 413
Query: 493 SKQTTESRRKGTPXTEASRARENEET 570
SK+ +R+ + R +++T
Sbjct: 414 SKKNKSTRKNDDNIPSPPKTRSSKKT 439
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 331 TERPKQP-VGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQT 504
+ PK P V S+ + + K+TRK+ + PP+ R S K+SD L T++ T
Sbjct: 331 SSEPKVPHVNDENVSSTPRAHSSKKNKSTRKNVDNVP-SPPKTRSSKKTSDILTTTQPT 388
>At2g03800.1 68415.m00339 expressed protein
Length = 317
Score = 31.9 bits (69), Expect = 0.40
Identities = 30/126 (23%), Positives = 53/126 (42%)
Frame = +2
Query: 197 GQLFSSAALLSRHTTLAHTPLGYANDVLHRLRLIRSLPRNKHANPQKGQSNLSALGSRAL 376
G++ LSRHT +++ P +H + ++ ++ + PQ G+ +AL S +
Sbjct: 69 GEVVDEVIFLSRHTAVSNRPA----LTVHPIGVLHL--KDGESPPQGGKPGWAALPSTRI 122
Query: 377 GAIPLLRPNLKLPESPASNSTLNLQKPGSHSNPLTNSKLPNKRQSQGEKEHRPQRRPVPE 556
G P R K+ E+ + +H P+TN P G E +R+ +
Sbjct: 123 G--PWFRLLKKMAEAHGLVPEFEITLEATHHGPITNK--PTMFLEIGSTEEYWKRQDAAQ 178
Query: 557 KMRKLM 574
M LM
Sbjct: 179 VMALLM 184
>At2g18050.2 68415.m02099 histone H1-3 (HIS1-3) similar to histone
H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical
to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3
[Arabidopsis thaliana] GI:1809305
Length = 138
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSS 477
+Q +K+ + KQ TRS +T P + + K K VK KS+KSS
Sbjct: 72 QQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSS 126
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 295 DTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKS 423
+ K K+TR S+ RPK+ V K + QPK+ + S
Sbjct: 84 EDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSS 126
>At2g18050.1 68415.m02098 histone H1-3 (HIS1-3) similar to histone
H1 [Lycopersicon pennellii] SWISS-PROT:P40267; identical
to cDNA histone H1-3 (His1-3) GI:1809314, histone H1-3
[Arabidopsis thaliana] GI:1809305
Length = 167
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSS 477
+Q +K+ + KQ TRS +T P + + K K VK KS+KSS
Sbjct: 101 QQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSS 155
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 295 DTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKS 423
+ K K+TR S+ RPK+ V K + QPK+ + S
Sbjct: 113 EDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSS 155
>At4g19590.1 68417.m02879 DNAJ heat shock N-terminal
domain-containing protein protein YJL162c, Saccharomyces
cerevisiae, PIR2:S56945; contains Pfam PF00226: DnaJ
domain;
Length = 345
Score = 30.7 bits (66), Expect = 0.93
Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 6/96 (6%)
Frame = +1
Query: 301 KPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPK---TTRKSSVKLDVKPPEARKSL- 468
K P Q ++ +P+QP +K P QPK ++ + K P ++ S+
Sbjct: 152 KQPPDQQKQPPNQPRQPPNQQKQPQNEPKQPPNQPKQPPNQASTNGRARSKKPTSKVSIF 211
Query: 469 -KSSDKLETSKQTTESRR-KGTPXTEASRARENEET 570
+K ET + + + TP + E EET
Sbjct: 212 WTMCNKCETQYEYVRATEIEKTPTEKEKTPTEKEET 247
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 30.7 bits (66), Expect = 0.93
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = +1
Query: 331 TERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEAR----KSLKSSDKLETSK 498
++RP P +T+ PT+P T ++ K D PP+ + + L E K
Sbjct: 328 SKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPRPLSPYASYEDLK 387
Query: 499 QTTESRRKGTPXTEASRARENEETHAKIEIIMVLTRD 609
T T ++++E + T +E +V D
Sbjct: 388 PPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPVPD 424
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/86 (29%), Positives = 32/86 (37%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLET 492
KQ + ERP P + + P+ P T S+ K D P S +DK T
Sbjct: 435 KQVEEKKERPLSPY-----ARYENLKPPSSPSPTASSTRKSDSLSPGPTDS--DTDKSST 487
Query: 493 SKQTTESRRKGTPXTEASRARENEET 570
+T T TE S A ET
Sbjct: 488 VAKTVTETAVATSVTETSVATSVPET 513
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 0.93
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +1
Query: 298 TKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSS 477
+ P+P R S +P +P SD++ P PKT + S K E+ K +
Sbjct: 392 SSPSPNPPRTSEPKPSKPEPVMPKP--SDSSKPETPKTPEQPSPKPQPPKHESPKPEEPE 449
Query: 478 DKLETSKQ 501
+K E KQ
Sbjct: 450 NKHELPKQ 457
>At2g37100.1 68415.m04552 protamine P1 family protein contains Pfam
PF00260: Protamine P1
Length = 297
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRK--SSTRSDTTAPTQPKTTRKSSVKLD-VKPPEARKSLKSSDK 483
K +S R ++P+ R+ +S ++T PT PK T V+++ K P+ + S
Sbjct: 28 KSRSRSRSRSRRPIFFRRKNASAAAETQEPTSPKVTCMGQVRINRSKKPKPETARVSGGA 87
Query: 484 LETSKQTTESRRKG 525
E +Q SRR G
Sbjct: 88 TERRRQ---SRRCG 98
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Frame = +2
Query: 314 NKHANPQKGQSNLSALGSRALGAI----PLLRPNLKLPESPASNST--LNLQKPGSHSNP 475
N+H NPQ+ + + A + G P P+ P+ P T + Q P P
Sbjct: 341 NQHVNPQRPRFSNQAPNQQPTGRFDPQSPNQPPSAPRPQFPNQQPTGRFDPQFPSQPPRP 400
Query: 476 LTNSKLPNKRQSQGEKEHRPQRRPVPEKMR 565
++ PN++ + P +RP P + R
Sbjct: 401 QFPNQAPNQQSTGRFNPQFPNQRPSPPQSR 430
>At5g09400.1 68418.m01089 potassium transporter family protein
similar to K+ transporter HAK5 [Arabidopsis thaliana]
GI:7108597; contains Pfam profile PF02705: K+ potassium
transporter; KUP/HAK/KT Transporter family member,
PMID:11500563; Note: possible sequencing error causes a
frameshift in the 4th exon|15810448|gb|AY056263
Length = 858
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 394 PTQPKT-TRKSSVKLDVKPPEARKSLKSSDKLETS 495
P Q ++ TR SS +L V PE +SLK +KLE S
Sbjct: 193 PNQLRSDTRISSFRLKVPCPELERSLKLKEKLENS 227
>At2g30620.1 68415.m03731 histone H1.2 nearly identical to SP|P26569
Histone H1.2 {Arabidopsis thaliana}
Length = 273
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = +2
Query: 35 KPQRKSLADKRKTLSSVAKRKSSGRPTISSH-KTNPSPAKQL 157
KP+ KS+A KT + AK K+ RP +S T SP K++
Sbjct: 198 KPKSKSVAAVSKTKAVAAKPKAKERPAKASRTSTRTSPGKKV 239
>At2g30575.1 68415.m03725 glycosyl transferase family 8 protein
contains Pfam profile: PF01501 glycosyl transferase
family 8
Length = 610
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 35 KPQRKSLADKRKTLSSVAKRKSSGRPTISSHKTNPSPAKQLKKRTTEIE 181
KP+ + ++ T+SS A+ K S R +HKT P ++ T ++
Sbjct: 118 KPKEEQAVSQKTTVSSNAEVKISARDIQLNHKTEFRPPSSKSEKNTRVQ 166
>At2g28440.1 68415.m03455 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains similarity to vegetative cell wall protein gp1
[Chlamydomonas reinhardtii] gi|12018147|gb|AAG45420; +
Length = 268
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 386 PLLRPNLKLPESPASNSTLNLQKPGSHSNPLTNSKLPNKRQSQGEKEHRPQRRPVPEKM 562
P P + P +P+S+ ++ +P S S+P +S LP + P P PE +
Sbjct: 83 PSSSPEVDSPLAPSSSPEVDSPQPPS-SSPEADSPLPPSSSPEANSPQSPASSPKPESL 140
>At1g61100.1 68414.m06883 disease resistance protein (TIR class),
putative domain signature TIR exists, suggestive of a
disease resistance protein.
Length = 808
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 358 SRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKS-LKSSDKLETSKQTTESRRKGT-P 531
S +++ R + Q K + K +VK PE RKS S + ET +T + +
Sbjct: 692 SAEANARLSSNGTAQEKEDKSGEKKNNVKNPETRKSKTPSRTRAETMSKTAKKPTVASRT 751
Query: 532 XTEASRARENEETHAKIEIIMV 597
+ ++ + EE +IE +++
Sbjct: 752 MAQKNKFEKEEEMRKRIENLVM 773
>At3g08670.1 68416.m01007 expressed protein
Length = 567
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +1
Query: 337 RPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSL-KSSDKLETSKQTTES 513
RP P SS R T PT+ + +SS ++P + S+ K+ L + T S
Sbjct: 192 RPSSPSSRSSSSARPST--PTRTSSASRSSTPSRIRPGSSSSSMDKARPSLSSRPSTPTS 249
Query: 514 RRK---GTPXTEASRARENEET 570
R + +P ASR T
Sbjct: 250 RPQLSASSPNIIASRPNSRPST 271
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 29.5 bits (63), Expect = 2.1
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +2
Query: 323 ANPQ-KGQSNLSALGSRALGAIPLLRPNLKLPESPASNSTLNLQKPGSHSNPLTNSKLPN 499
ANP GQ NLS L + G+ L +P+L + + A +S N H + N+ +
Sbjct: 2 ANPWWTGQVNLSGLETTPPGSSQLKKPDLHISMNMAMDSGHNNH---HHHQEVDNNNNDD 58
Query: 500 KRQSQGEKEHRPQRRPVPEKMRK 568
R + +H P+ V R+
Sbjct: 59 DRDNLSGDDHEPREGAVEAPTRR 81
>At1g74160.1 68414.m08589 expressed protein
Length = 1030
Score = 29.5 bits (63), Expect = 2.1
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 295 DTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPT-QPKTTRKSSVKLDVKPPEARKSLK 471
D K + R S+++P+Q V +S S + +P Q K PP++ KS K
Sbjct: 557 DKKSDSRNVRSSSKKPQQ-VSKESASKSSGSVSPRLQQKKLEYDKRSRPPTPPDSSKSRK 615
Query: 472 SSDKLETSKQTTESRRK 522
S++ + RR+
Sbjct: 616 PSNQQLVESTSPGGRRR 632
>At1g70950.1 68414.m08185 expressed protein
Length = 478
Score = 29.5 bits (63), Expect = 2.1
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Frame = +1
Query: 289 EIDTKPAPKQTRKST--ERPKQPVGSR-KSSTRSDTTAPTQPKTTRKSSVKLDVKPPEAR 459
++ K A ++T+ S+ K V ++ + R T +QPK SS K + +PP A
Sbjct: 252 DVTPKAASRRTKGSSLSSNSKTNVDAKSQKELRPKKTIESQPK----SSNKTETRPPIAT 307
Query: 460 ---KSLKSSDKLETSKQTTESRRKGTPXTEASR---ARENEETHAK 579
K+ +S KLE S +T R K + E + + E+ HAK
Sbjct: 308 NRCKTSTTSSKLEMSTGSTSFRFKCSERAEKRKEFYMKLEEKIHAK 353
>At3g54320.1 68416.m06003 ovule development protein, putative
similar to ovule development protein aintegumenta
(GI:1209099) [Arabidopsis thaliana]
Length = 427
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 337 RPKQPVGSRKSSTRSDTTA-PTQPKTTRKSSV 429
RPK+ ++KSS D + PT P +TR+SS+
Sbjct: 34 RPKRAKRAKKSSPSGDKSHNPTSPASTRRSSI 65
>At1g73960.1 68414.m08565 expressed protein similar to TATA binding
protein associated factor (GI:2827282) [Homo sapiens];
similar to Transcription initiation factor TFIID 150 kDa
subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325)
[Drosophila melanogaster]
Length = 1390
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +1
Query: 70 NVKFCCEKKIFGKAYNFVAQNESFTS*TIEKADNRDRT 183
+VKF E IFGK A ES T +KADN +RT
Sbjct: 1222 SVKFASEGDIFGKELQCTA--ESGKPSTSQKADNNNRT 1257
>At1g23790.1 68414.m03001 expressed protein
Length = 518
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/75 (28%), Positives = 33/75 (44%)
Frame = +1
Query: 364 KSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRRKGTPXTEA 543
KSS + + + P +T R ++ L EA KS KLE +++ G T +
Sbjct: 242 KSSAKKNDSPPPSVRTRRATAASLLEDEREAPKSTSKYSKLEKPEKSLS--LPGRLSTLS 299
Query: 544 SRARENEETHAKIEI 588
A + ET KI +
Sbjct: 300 KEAMQQRETAQKIAL 314
>At1g04450.1 68414.m00437 p21-rho-binding domain-containing protein
contains Pfam PF00786: P21-Rho-binding domain
Length = 220
Score = 29.1 bits (62), Expect = 2.8
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +1
Query: 331 TERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKS-SDKLETSKQTT 507
T++PK RKS T S +P + ++ +S D++P R+ +S +++S +
Sbjct: 90 TDKPKHKKTRRKSETVSQNGSPPRRNSSASAS---DMQPKNTRRHHRSRHGSIDSSNDPS 146
Query: 508 ESRRKGTPXT----EASRARENEETHAK 579
RR+ T E S + TH++
Sbjct: 147 VRRRRVVSVTTNDMEGSYPLSDSSTHSR 174
>At2g18110.1 68415.m02105 elongation factor 1-beta, putative /
EF-1-beta, putative nearly identical to eEF-1beta
[Arabidopsis thaliana] GI:398606
Length = 231
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 325 KSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQ 501
+ TE K+ R +S + A T+ K + KSSV +D+KP + +K ++ S Q
Sbjct: 115 EETEEEKKAAEERAASVK----ASTKKKESGKSSVLMDIKPWDDETDMKKLEEAVRSIQ 169
>At1g78920.1 68414.m09201 vacuolar-type H+-translocating inorganic
pyrophosphatase (AVPL1) identical to vacuolar-type
H+-translocating inorganic pyrophosphatase GI:6901676
from [Arabidopsis thaliana]
Length = 802
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = -1
Query: 400 GSEQWYRSECSTSESRQVALAFLWICVFVSGQASYQSQA 284
G+E ++R++ ST + LAF+ +C+++ + Q +A
Sbjct: 109 GAEGFFRTQYSTISKMAILLAFVILCIYLFRSLTPQQEA 147
>At1g30230.1 68414.m03698 elongation factor 1-beta / EF-1-beta
identical to SP|P48006 Elongation factor 1-beta
(EF-1-beta) {Arabidopsis thaliana}
Length = 231
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 325 KSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQ 501
+ TE K+ R +S + A T+ K + KSSV +D+KP + +K ++ S Q
Sbjct: 115 EETEEEKKAAEERAASVK----ASTKKKESGKSSVLIDIKPWDDETDMKKLEEAVKSIQ 169
>At5g46750.1 68418.m05759 human Rev interacting-like family protein
/ hRIP family protein contains Pfam profile PF01412:
Putative GTP-ase activating protein for Arf
Length = 402
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 307 APKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKL 486
A Q +S+E ++SS + + + PK ++K KP +RKS K+ L
Sbjct: 138 ATSQPVESSENGFTSESPKESSLKQEAAVVSSPKASQKVVASTFKKPLVSRKSGKTGG-L 196
Query: 487 ETSKQTTESR 516
K TT+S+
Sbjct: 197 GARKLTTKSK 206
>At5g27120.1 68418.m03237 SAR DNA-binding protein, putative strong
similarity to SAR DNA-binding protein-1 [Pisum sativum]
GI:3132696; contains Pfam profile PF01798: Putative
snoRNA binding domain
Length = 533
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = +2
Query: 17 KETKLIKPQRKSLADKRKTLSSVAKRKSSGRPTISSHKTNPSPAKQLKKRTTEIE 181
KE K K ++K+ ++ +K+KS+ + T + +T PAK+ KK+ + E
Sbjct: 455 KEKKDKKKKKKADDEEEAKTEEPSKKKSNKKKTEAEPETAEEPAKKEKKKKRKHE 509
>At5g24280.1 68418.m02856 expressed protein ; expression supported
by MPSS
Length = 1634
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +1
Query: 304 PAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDK 483
P R PKQ V + + + T P++ K +K+ VK+D + LKSSDK
Sbjct: 757 PIGNSVRAGKAPPKQIVAVVRPACFTSLT-PSK-KLDQKNIVKMDGEEMVMVVKLKSSDK 814
Query: 484 LETSKQTTESRRKG 525
+S++ + RKG
Sbjct: 815 NISSQRLFPTSRKG 828
>At4g39840.1 68417.m05645 expressed protein
Length = 451
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLET 492
K+ T+ +KS+ S +++ T + S KL PP +KS SS +
Sbjct: 142 KKLNSGTKSTNSTSSIKKSADLSKSSSSKNKTTIKPPSSKLS-SPPSEKKSQPSSKPVTK 200
Query: 493 SKQT 504
SKQ+
Sbjct: 201 SKQS 204
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 3/112 (2%)
Frame = +1
Query: 295 DTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKS 474
+ KP K+ +S+ + + + + D+++ + K + + + + +K
Sbjct: 331 EEKPERKKKEESSSQGEGKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKE 390
Query: 475 SD---KLETSKQTTESRRKGTPXTEASRARENEETHAKIEIIMVLTRDVSRT 621
++ K E+S Q ++ + S+ +EN + KIE V + D S T
Sbjct: 391 TEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIE--QVESTDSSNT 440
>At2g33490.1 68415.m04105 hydroxyproline-rich glycoprotein family
protein Common family member:At3g26910 [Arabidopsis
thaliana]
Length = 623
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +1
Query: 292 IDTKPAPKQTRKSTER------PKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPE 453
+ +KP P + +T P+ PV + S T +PT T + S + +PP
Sbjct: 459 LTSKPLPNKPLSTTSHLYSGPIPRNPVSKLPKVSSSPTASPTFVSTPKISELHELPRPP- 517
Query: 454 ARKSLKSSDKL 486
R S KSS +L
Sbjct: 518 PRSSTKSSREL 528
>At2g01100.3 68415.m00018 expressed protein
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/80 (20%), Positives = 34/80 (42%)
Frame = +1
Query: 307 APKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKL 486
A T +R K P +++++ S + + + + RKS + A SD+
Sbjct: 37 AKADTETKVKRSKGPKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRR 96
Query: 487 ETSKQTTESRRKGTPXTEAS 546
+ K + RR +P +++
Sbjct: 97 KEKKSRRQKRRSLSPSDDST 116
>At2g01100.2 68415.m00017 expressed protein
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/80 (20%), Positives = 34/80 (42%)
Frame = +1
Query: 307 APKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKL 486
A T +R K P +++++ S + + + + RKS + A SD+
Sbjct: 37 AKADTETKVKRSKGPKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRR 96
Query: 487 ETSKQTTESRRKGTPXTEAS 546
+ K + RR +P +++
Sbjct: 97 KEKKSRRQKRRSLSPSDDST 116
>At2g01100.1 68415.m00016 expressed protein
Length = 247
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/80 (20%), Positives = 34/80 (42%)
Frame = +1
Query: 307 APKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKL 486
A T +R K P +++++ S + + + + RKS + A SD+
Sbjct: 37 AKADTETKVKRSKGPKRKQRAASESSSESDSSSEVRRKSRRSHNKHRRHAHSDSDDSDRR 96
Query: 487 ETSKQTTESRRKGTPXTEAS 546
+ K + RR +P +++
Sbjct: 97 KEKKSRRQKRRSLSPSDDST 116
>At1g78580.1 68414.m09158 alpha, alpha-trehalose-phosphate synthase,
UDP-forming, putative / trehalose-6-phosphate synthase,
putative / UDP-glucose-glucosephosphate
glucosyltransferase, putative similar to
trehalose-6-phosphate synthase SL-TPS/P [Selaginella
lepidophylla] GI:4100325; contains Pfam profiles PF00982:
Glycosyltransferase family 20, PF02358:
Trehalose-phosphatase
Length = 942
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/56 (39%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
Frame = +2
Query: 422 PASNSTLNLQKPGSHSNPLTNSKLPNK---RQSQGEKEHRPQ------RRPVPEKM 562
P S ST N K GS S+ +NS NK R Q E++ RRP PEK+
Sbjct: 839 PPSKSTHNNNKSGSKSSSSSNSNNNNKSSQRSLQSERKSGSNHSLGNSRRPSPEKI 894
>At1g78120.1 68414.m09104 tetratricopeptide repeat (TPR)-containing
protein low similarity to SP|Q99615 DnaJ homolog
subfamily C member 7 (Tetratricopeptide repeat protein
2) {Homo sapiens}; contains Pfam profile PF00515: TPR
Domain
Length = 530
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 322 RKSTERPKQPVGSRKSSTRSDTTAPTQPKT-TRKSSVKLDVKPPEARKSLKSSDKLETSK 498
RKST+ QP +KS ++ P + RKSS ARKS+ S SK
Sbjct: 62 RKSTDTSSQP---KKSDSQKPQQKPKPDENHPRKSSESARKSSDSARKSISSGSSRTESK 118
Query: 499 QTTESRRKGTPXTEASRARENEETHAK 579
+ + + G + A + + T K
Sbjct: 119 RFSLNGVMGNIIVKPQPAVKTDVTQTK 145
>At1g33060.2 68414.m04076 no apical meristem (NAM) family protein
similar to NAC1 GB:AAF68626 GI:7716952 from (Medicago
truncatula)
Length = 652
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/99 (21%), Positives = 41/99 (41%)
Frame = +1
Query: 292 IDTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLK 471
+D AP++ R E+P PV ++K + + ++ V+ + A+ + +
Sbjct: 494 VDQGTAPRRIRLQIEQPLTPVTNKKERDADNYEEEDEVQSAMSKVVEEEPANLSAQGTAQ 553
Query: 472 SSDKLETSKQTTESRRKGTPXTEASRARENEETHAKIEI 588
+L+T + T S RE E +H K E+
Sbjct: 554 RRIRLQTRLRKPLITLNNTKRN--SNGREGEASHRKCEM 590
>At1g28060.1 68414.m03435 small nuclear ribonucleoprotein family
protein / snRNP family protein contains similarity to
U4/U6 small nuclear ribonucleoprotein hPrp3 [Homo
sapiens] gi|2708307|gb|AAC51926
Length = 786
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +3
Query: 219 PFCPGTPHWRIPPSDTQTTFSTA*D*YEACPET 317
P G+PH R+PPS T ST P T
Sbjct: 260 PTSEGSPHTRVPPSTTTPAVSTGTSFASTLPHT 292
>At1g15940.1 68414.m01913 expressed protein similar To
androgen-induced prostate proliferative shutoff
associated protein (GI:4559410) [Homo sapiens]
Length = 990
Score = 28.3 bits (60), Expect = 5.0
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Frame = +1
Query: 292 IDTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSL- 468
+ T+PA KQT K T K+ + KS+ + K+++K + A+K L
Sbjct: 433 VATQPAKKQTVKKTNPAKEDL--TKSNVKKHEDGIKTGKSSKKEKADNGLAKTSAKKPLA 490
Query: 469 ------KSSDKL---ETSKQTTESRRKGTPXTEASRARENE 564
S KL + K+ +E TP ++S++++ +
Sbjct: 491 ETMMVKPSGKKLVHSDAKKKNSEGASMDTPIPQSSKSKKKD 531
>At1g01300.1 68414.m00046 aspartyl protease family protein contains
Pfam domain, PF00026: eukaryotic aspartyl protease
Length = 485
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/77 (27%), Positives = 40/77 (51%)
Frame = +1
Query: 346 QPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRRKG 525
QP +S S+ + + +++ SS+ L++ +A S K+ D+L +S+ +SRR
Sbjct: 47 QPDSDSESLLESEFESGSDSESS--SSITLNLDHIDALSSNKTPDELFSSRLQRDSRRVK 104
Query: 526 TPXTEASRARENEETHA 576
+ T A++ THA
Sbjct: 105 SIATLAAQIPGRNVTHA 121
>At5g63550.1 68418.m07976 expressed protein
Length = 530
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 334 ERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTES 513
E ++ GS+KSS + +T PT + TR+ K++ R SL + + SK +
Sbjct: 77 EEEEEGSGSKKSSEK-ETVTPTSERPTRERK-KVE------RFSLSTPMRAPPSKSVSIE 128
Query: 514 RRKGTPXTE 540
+ +GTP E
Sbjct: 129 KGRGTPLRE 137
>At5g40340.1 68418.m04894 PWWP domain-containing protein KED,
Nicotiana tabacum, EMBL:AB009883
Length = 1008
Score = 27.9 bits (59), Expect = 6.6
Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +1
Query: 313 KQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLET 492
K + ER ++ S+K + T ++T+K + K E++K +S + ET
Sbjct: 724 KHGKMKKERKRKKSESKKEGGEGEETQKEANESTKKERKR---KKSESKK--QSDGEEET 778
Query: 493 SKQTTES-----RRKGTPXTEASRARENEET 570
K+ +ES +RK + + A E EET
Sbjct: 779 QKEPSESTKKERKRKNPESKKKAEAVEEEET 809
>At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2
(eEF1Balpha2) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686821
Length = 224
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +1
Query: 331 TERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDK 483
TE K+ R+++ + DT +PK + KSSV +DVKP + +K ++
Sbjct: 110 TEEEKKAAEEREAA-KKDTK---KPKESGKSSVLMDVKPWDDETDMKKLEE 156
>At4g25540.1 68417.m03682 DNA mismatch repair protein MSH3 (MSH3)
identical to SP|O65607 DNA mismatch repair protein MSH3
(AtMsh3) {Arabidopsis thaliana}
Length = 1081
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +2
Query: 62 KRKTLSSVAKRKSSGRPTISSHKTNPSPAKQLKKR 166
KRK LS S +P +S H NP P L +R
Sbjct: 47 KRKLLSDHLAAASPKKPKLSPHTQNPVPDPNLHQR 81
>At3g11760.1 68416.m01443 expressed protein
Length = 702
Score = 27.9 bits (59), Expect = 6.6
Identities = 21/62 (33%), Positives = 25/62 (40%)
Frame = +1
Query: 394 PTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRRKGTPXTEASRARENEETH 573
P P TRK VKL VK E ++ E + T E R KG T S R +
Sbjct: 10 PWPPLVTRKYEVKLSVKKLEGWDLVREGVP-EKDRLTVEIRWKGPKATLGSLRRSVKRNF 68
Query: 574 AK 579
K
Sbjct: 69 TK 70
>At3g05330.1 68416.m00581 cyclin family low similarity to
microtubule-binding protein TANGLED1 [Zea mays]
GI:11228986; contains Pfam profile PF00134: Cyclin,
N-terminal domain
Length = 444
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/72 (26%), Positives = 32/72 (44%)
Frame = +1
Query: 340 PKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRR 519
PK+ SR+ + + P P+T +KS + P ++K+ K E KQ S
Sbjct: 133 PKKSRKSRRLTMSQEDDGPKTPETQQKSR---EQNPETVSSNIKARRKKE--KQNRRSES 187
Query: 520 KGTPXTEASRAR 555
P + +R+R
Sbjct: 188 DSPPSLQRARSR 199
>At3g03790.2 68416.m00389 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1081
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 316 QTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSD 480
Q +S R +PV + K+ + D+ ++ K S + P E KSL+ SD
Sbjct: 924 QDEQSKTRSHEPVRTTKNQSGDDSPGKSEGKILLSSFLTSKPIPMEPAKSLQQSD 978
>At3g03790.1 68416.m00388 ankyrin repeat family protein / regulator of
chromosome condensation (RCC1) family protein similar to
hect domain and RLD 2 GB:NP_004658 [Homo sapiens];
contains Pfam PF00415: Regulator of chromosome
condensation (RCC1); contains Pfam PF00023: Ankyrin
repeat; similar to rjs (GI:3414809) [Mus musculus];
similar to HERC2 (GI:4079809) [Homo sapiens]
Length = 1078
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 316 QTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSD 480
Q +S R +PV + K+ + D+ ++ K S + P E KSL+ SD
Sbjct: 921 QDEQSKTRSHEPVRTTKNQSGDDSPGKSEGKILLSSFLTSKPIPMEPAKSLQQSD 975
>At2g33620.3 68415.m04122 DNA-binding family protein / AT-hook
protein 1 (AHP1) identical to AT-hook protein 1
[Arabidopsis thaliana] gi|2598227|emb|CAA10857
Length = 351
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 311 RNKHANPQKGQSNLSALGS---RALGAIPLLR---PNLKLPESPASNSTLNLQKPGSHSN 472
++ A PQ+ Q+ + G AL P+ P P S NS LN+ PG S
Sbjct: 27 QHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESG 86
Query: 473 PLTNS-KLPNKRQSQGEKEHRP 535
+T + P K++ +++ P
Sbjct: 87 GMTGTGSEPVKKRRGRPRKYGP 108
>At2g33620.2 68415.m04121 DNA-binding family protein / AT-hook
protein 1 (AHP1) identical to AT-hook protein 1
[Arabidopsis thaliana] gi|2598227|emb|CAA10857
Length = 351
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 311 RNKHANPQKGQSNLSALGS---RALGAIPLLR---PNLKLPESPASNSTLNLQKPGSHSN 472
++ A PQ+ Q+ + G AL P+ P P S NS LN+ PG S
Sbjct: 27 QHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESG 86
Query: 473 PLTNS-KLPNKRQSQGEKEHRP 535
+T + P K++ +++ P
Sbjct: 87 GMTGTGSEPVKKRRGRPRKYGP 108
>At2g33620.1 68415.m04120 DNA-binding family protein / AT-hook
protein 1 (AHP1) identical to AT-hook protein 1
[Arabidopsis thaliana] gi|2598227|emb|CAA10857
Length = 351
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +2
Query: 311 RNKHANPQKGQSNLSALGS---RALGAIPLLR---PNLKLPESPASNSTLNLQKPGSHSN 472
++ A PQ+ Q+ + G AL P+ P P S NS LN+ PG S
Sbjct: 27 QHSQAQPQQSQNRPLSFGGDDGTALYKQPMRSVSPPQQYQPNSAGENSVLNMNLPGGESG 86
Query: 473 PLTNS-KLPNKRQSQGEKEHRP 535
+T + P K++ +++ P
Sbjct: 87 GMTGTGSEPVKKRRGRPRKYGP 108
>At1g32810.1 68414.m04044 expressed protein
Length = 654
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 301 KPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSD 480
+P P T RPK V K+S+ S T +P T+R S L +P + ++D
Sbjct: 133 RPIP-HTVSGNGRPKMVVCIGKTSSSSATEKSPKPSTSRNSIPGLKQQPGDDDNDANTND 191
Query: 481 K 483
+
Sbjct: 192 E 192
>At1g21730.1 68414.m02720 kinesin-related protein (MKRP1) Similar to
gb|U06698 neuronal kinesin heavy chain from Homo sapiens
and contains a PF|00225 Kinesin motor domain. EST
gb|AA042507 comes from this gene; identical to cDNA
MKRP1 mRNA for kinesin-related protein, GI:16902291,
kinesin-related protein [Arabidopsis thaliana]
GI:16902292
Length = 890
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +1
Query: 367 SSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRRKGTPXTEAS 546
S+TRS ++ P R+S + +K PE S S TS R +P T ++
Sbjct: 2 SATRSQRSSTISPARPRRSPATIPMKRPETPSSSHFSASPVTSSSPL-LRSSPSPSTSSA 60
Query: 547 RARENEETHAKIEIIMVLT 603
A K++ + +T
Sbjct: 61 AASSTAVASTKLKENITVT 79
>At1g16720.1 68414.m02005 expressed protein
Length = 598
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 310 PKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPP 450
P+ S+ P P +K+ TR T + + T + KLDV PP
Sbjct: 44 PRAQSSSSPSPSPPSDKKKTKTRPGTITTKESEET--VAKKLDVAPP 88
>At5g41780.1 68418.m05087 myosin heavy chain-related weak similarity
to M protein, serotype 5 precursor (SP:P02977)
{Streptococcus pyogenes} and to Myosin heavy chain,
non-muscle (SP:Q99323) (Zipper protein) (Myosin II)
{Drosophila melanogaster}
Length = 537
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 430 KLDVKPPEARKSLKSS-DKLETSKQTTESRRKGTPXTEASRARENEETHAKIEII 591
K ++K + +++L + KLE T +RK S+ EN++ H KI +I
Sbjct: 200 KAEMKIVKEKEALWNKVQKLEAGVDTFRKKRKEFNEEMKSKITENQKLHTKIAVI 254
>At3g53760.1 68416.m05939 tubulin family protein similar to
SP|Q9SC88 Gamma-tubulin complex component 4 homolog
{Medicago truncatula}, SP|Q9UGJ1|GCP4_HUMAN
Gamma-tubulin complex component 4 {Homo sapiens};
contains Pfam profile PF04130: Spc97 / Spc98 family
Length = 745
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -1
Query: 376 ECSTSESRQVALAFLWICVFVSGQASYQSQAVENVVCVSEGGMRQC 239
EC+ R +A + LW V V + +A+++ + +G QC
Sbjct: 377 ECTVDSVRAIAASHLWQLVVVRADLNGHLKALKDYFLLEKGDFFQC 422
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 27.5 bits (58), Expect = 8.7
Identities = 23/86 (26%), Positives = 37/86 (43%)
Frame = +1
Query: 319 TRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSK 498
T +ST R + S K++ DTT + T +K+ D ++DK +K
Sbjct: 76 TAEST-REGADIASEKAAGMRDTTGEVRDSTAQKTKETADY----------TADKAREAK 124
Query: 499 QTTESRRKGTPXTEASRARENEETHA 576
T + K T A +ARE ++ A
Sbjct: 125 DKTADKTKETADYAAEKAREAKDRTA 150
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +1
Query: 292 IDTKPAPKQTRKSTERPKQPVGSRKSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLK 471
+DT A ++T + K+P+ SR +R + P KS+++ V S
Sbjct: 128 VDTNKAKQETNPKSSGGKEPLASRVPISRRPRPIVSTPVVPFKSALRSSVASKNELTSSC 187
Query: 472 SSDKLETSKQTTESRR 519
SS + S +T S +
Sbjct: 188 SSIESCLSVSSTASNK 203
>At2g07360.1 68415.m00843 SH3 domain-containing protein contains
Pfam profile PF00018: SH3 domain
Length = 1196
Score = 27.5 bits (58), Expect = 8.7
Identities = 24/78 (30%), Positives = 33/78 (42%)
Frame = +2
Query: 347 NLSALGSRALGAIPLLRPNLKLPESPASNSTLNLQKPGSHSNPLTNSKLPNKRQSQGEKE 526
N + RA G L R LKLPE+P+ +S K P KL +R E
Sbjct: 422 NTERMDERAAGWYRLTREILKLPEAPSLSSK---DKSNKTKRPQPLIKLVMRRL---ESS 475
Query: 527 HRPQRRPVPEKMRKLMQK 580
R RPV +++Q+
Sbjct: 476 FRSFSRPVLHAAARVVQE 493
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 391 APTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESRR 519
+P+ P+ S+ + + PP A S SSD+ + T+S R
Sbjct: 440 SPSSPEMVSSSTGQSSLFPPSAPTSQVSSDQASATSSLTDSSR 482
>At1g31460.1 68414.m03852 expressed protein
Length = 301
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 416 ESPASNSTLNLQKPGSHSNPLTNSKLPNKRQSQGEK 523
E +S+S++N QKP SHS + N R++ G+K
Sbjct: 65 EPVSSSSSMNRQKPLSHSKSV-NVNFSGNRRNPGKK 99
>At1g20480.1 68414.m02552 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to
SP|Q9S725 from Arabidopsis thaliana and SP|P17814 from
Oryza sativa; contains Pfam AMP-binding enzyme domain
PF00501
Length = 565
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/73 (34%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +1
Query: 340 PKQPVGSR-KSSTRSDTTAPTQPKTTRKSSVKLDVKPPEARKSLKSSDKLETSKQTTESR 516
P Q G R K R +T T+P +R VK V + L SS TSK S
Sbjct: 179 PSQSYGDRVKLVGRLETMIETEPSESR---VKQRVNQDDTAALLYSSGTTGTSKGVMLSH 235
Query: 517 RKGTPXTEASRAR 555
R +A RAR
Sbjct: 236 RNLIALVQAYRAR 248
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,965,366
Number of Sequences: 28952
Number of extensions: 292420
Number of successful extensions: 1492
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1485
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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