Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0920
         (675 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   0.95 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    23   6.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   6.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   6.7  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   8.8  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -1

Query: 585 PVSVLSTPPHRLELSLACSLNDLE 514
           P  V +TP H+   S +CSL+ LE
Sbjct: 115 PAEVPTTPEHKSAASSSCSLSTLE 138


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 271 TLKEASWQLKGEVDASKRPQNSLLQEVVDFD 363
           T+ E + QL+ EV+  +R   SLL  V+D D
Sbjct: 343 TVDEKNKQLQ-EVEMRERSSKSLLANVLDID 372


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 281 SFKVFSSSRECVVLVFAGVA 222
           + K+ SSS E ++ +F GVA
Sbjct: 528 ALKMLSSSAETIIFMFLGVA 547


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 12/48 (25%), Positives = 22/48 (45%)
 Frame = +2

Query: 194 TIEEKQSEFEQRQQRLKQHIHD*RKRL*KKPLGNSKVKWMHRNVLKTH 337
           TI+   ++ +Q++  LK+   D      + P    +V W    V +TH
Sbjct: 799 TIQRLTAKLKQQEMELKRMHMDVASLTQQMPRLKEQVDWQAERVARTH 846


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +2

Query: 200 EEKQSEFEQRQQRLKQH 250
           ++KQ + ++RQQ+ +QH
Sbjct: 267 QQKQQQLQRRQQQQQQH 283


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 452,771
Number of Sequences: 2352
Number of extensions: 6079
Number of successful extensions: 16
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)