Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0920
         (675 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98494-1|CAA67120.1|  672|Homo sapiens M phase phosphoprotein 10...    89   1e-17
BC126389-1|AAI26390.1|  681|Homo sapiens M-phase phosphoprotein ...    89   1e-17

>X98494-1|CAA67120.1|  672|Homo sapiens M phase phosphoprotein 10
           protein.
          Length = 672

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 39/65 (60%), Positives = 53/65 (81%)
 Frame = +1

Query: 259 LEEKTLKEASWQLKGEVDASKRPQNSLLQEVVDFDLTTRPAPIITEQTTVSLEDIIKRRI 438
           LE++ L++  WQL+GEV A KRP+NSLL+E + FD   R AP+ITE+TT+ LEDIIK+RI
Sbjct: 365 LEKELLEKKPWQLQGEVTAQKRPENSLLEETLHFDHAVRMAPVITEETTLQLEDIIKQRI 424

Query: 439 KDKAW 453
           +D+AW
Sbjct: 425 RDQAW 429



 Score = 39.5 bits (88), Expect = 0.011
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 504 KEEILDHSKSKLSLAQVYEAEYLKQKQAASGRD 602
           K   LDH KSKLSLA++YE EY+K  Q  +  +
Sbjct: 447 KRLTLDHEKSKLSLAEIYEQEYIKLNQQKTAEE 479


>BC126389-1|AAI26390.1|  681|Homo sapiens M-phase phosphoprotein 10
           (U3 small nucleolar ribonucleoprotein) protein.
          Length = 681

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 39/65 (60%), Positives = 53/65 (81%)
 Frame = +1

Query: 259 LEEKTLKEASWQLKGEVDASKRPQNSLLQEVVDFDLTTRPAPIITEQTTVSLEDIIKRRI 438
           LE++ L++  WQL+GEV A KRP+NSLL+E + FD   R AP+ITE+TT+ LEDIIK+RI
Sbjct: 374 LEKELLEKKPWQLQGEVTAQKRPENSLLEETLHFDHAVRMAPVITEETTLQLEDIIKQRI 433

Query: 439 KDKAW 453
           +D+AW
Sbjct: 434 RDQAW 438



 Score = 39.5 bits (88), Expect = 0.011
 Identities = 17/33 (51%), Positives = 22/33 (66%)
 Frame = +3

Query: 504 KEEILDHSKSKLSLAQVYEAEYLKQKQAASGRD 602
           K   LDH KSKLSLA++YE EY+K  Q  +  +
Sbjct: 456 KRLTLDHEKSKLSLAEIYEQEYIKLNQQKTAEE 488


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,675,231
Number of Sequences: 237096
Number of extensions: 978102
Number of successful extensions: 1845
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)