Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0920
         (675 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070710-1|AAL48181.1|  662|Drosophila melanogaster SD02943p pro...    90   3e-18
AE014134-1532|AAF52688.1|  662|Drosophila melanogaster CG13097-P...    90   3e-18
AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA...    29   4.4  
AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-P...    29   7.7  
AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-P...    29   7.7  

>AY070710-1|AAL48181.1|  662|Drosophila melanogaster SD02943p
           protein.
          Length = 662

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +1

Query: 262 EEKTLKEASWQLKGEVDASKRPQNSLLQEVVDFDLTTRPAPIITEQTTVSLEDIIKRRIK 441
           E+  L E  WQLKGEV A+ RPQNSLL+E++DFD TTRP   ITE+   S+EDIIK+RI+
Sbjct: 355 EDIVLGEKPWQLKGEVKAANRPQNSLLEEILDFDSTTRPTAPITEEDNRSIEDIIKQRIR 414

Query: 442 DKAW 453
           DKAW
Sbjct: 415 DKAW 418



 Score = 34.3 bits (75), Expect = 0.15
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 489 PTGIPKEEILDHSKSKLSLAQVYEAEYLKQKQ 584
           P    K+ +LD  KSK SL+Q+YEA+Y ++ +
Sbjct: 431 PQEYRKQLVLDQEKSKQSLSQIYEAQYQREME 462


>AE014134-1532|AAF52688.1|  662|Drosophila melanogaster CG13097-PA
           protein.
          Length = 662

 Score = 89.8 bits (213), Expect = 3e-18
 Identities = 41/64 (64%), Positives = 50/64 (78%)
 Frame = +1

Query: 262 EEKTLKEASWQLKGEVDASKRPQNSLLQEVVDFDLTTRPAPIITEQTTVSLEDIIKRRIK 441
           E+  L E  WQLKGEV A+ RPQNSLL+E++DFD TTRP   ITE+   S+EDIIK+RI+
Sbjct: 355 EDIVLGEKPWQLKGEVKAANRPQNSLLEEILDFDSTTRPTAPITEEDNRSIEDIIKQRIR 414

Query: 442 DKAW 453
           DKAW
Sbjct: 415 DKAW 418



 Score = 34.3 bits (75), Expect = 0.15
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 489 PTGIPKEEILDHSKSKLSLAQVYEAEYLKQKQ 584
           P    K+ +LD  KSK SL+Q+YEA+Y ++ +
Sbjct: 431 PQEYRKQLVLDQEKSKQSLSQIYEAQYQREME 462


>AE014134-2863|AAF53626.1| 4010|Drosophila melanogaster CG5526-PA
           protein.
          Length = 4010

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = +1

Query: 268 KTLKEASWQLKGEVDAS--KRPQNSLLQEVVDFDLTTRPAPIITEQTTVSLEDIIKRRIK 441
           KTL E SW   GE+ +S  K  +   L ++  F L  R    +    T  LEDI  R +K
Sbjct: 318 KTLLEESWY--GEIHSSLLKASKRGQLPDIRRFTLVKRFFNCVAALMTQQLEDICIRSLK 375

Query: 442 DKA 450
           + A
Sbjct: 376 EYA 378


>AE013599-2147|AAF58087.2| 7210|Drosophila melanogaster CG18255-PD,
            isoform D protein.
          Length = 7210

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 259  LEEKTLKEASWQLKGEVDASKRPQNSLLQEVV 354
            LEEK L EAS Q +G+ D  KR Q   + EVV
Sbjct: 3003 LEEKEL-EASAQKQGDQDVEKRSQKPEVSEVV 3033


>AE013599-2141|AAM70936.1| 9270|Drosophila melanogaster CG18255-PA,
            isoform A protein.
          Length = 9270

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +1

Query: 259  LEEKTLKEASWQLKGEVDASKRPQNSLLQEVV 354
            LEEK L EAS Q +G+ D  KR Q   + EVV
Sbjct: 3003 LEEKEL-EASAQKQGDQDVEKRSQKPEVSEVV 3033


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,780,897
Number of Sequences: 53049
Number of extensions: 290310
Number of successful extensions: 840
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2930645700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)