Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0917
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled ...    23   6.7  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    23   6.7  

>AY500851-1|AAS77205.1|  605|Anopheles gambiae G-protein coupled
           receptor 3 protein.
          Length = 605

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 246 WQFLNHFAGRYYASAEE 196
           W +L H A +Y+A A++
Sbjct: 7   WAYLRHIAVQYHAEAQD 23


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
 Frame = +1

Query: 331 YSTGNWYYGV-----IVHLNLIIIKTFKMYLSIIYYIICM 435
           YS   ++YG+     +    +I + +FKM LSII+ ++ M
Sbjct: 495 YSETVYWYGLDPLWMLATNKIIFLNSFKMKLSIIFGVVHM 534


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,290
Number of Sequences: 2352
Number of extensions: 13596
Number of successful extensions: 63
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)