Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0916
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.14 
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    25   0.43 
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    23   2.3  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   5.3  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.3  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    21   7.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           21   7.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   9.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.2  

>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.14
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -2

Query: 240 FPGIRFSSRKLGSDAPSGCLRDAILASVMSLPLY 139
           +P + F SRKLG D  +        AS+++L +Y
Sbjct: 375 YPSVHFISRKLGEDLVTHSGHKLAKASIVNLHIY 408


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -2

Query: 240 FPGIRFSSRKLGSDAPSGCLRDAILASVMSLPLY 139
           +P + F SRKLG D  +         S+++L +Y
Sbjct: 375 YPSVHFISRKLGEDLVTHSGHKLAKGSIVNLHIY 408


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 240 FPGIRFSSRKLGSD 199
           +P + F SRKLG D
Sbjct: 76  YPSVHFISRKLGED 89


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = +1

Query: 259 ELKSNLHLEVSPPVVTTEPR--SEKHEKGDKCVARIVAGSKPD 381
           ELK N+     P  + T+    SEK ++G   + R +  +KPD
Sbjct: 64  ELKKNM-----PDAIETDCSKCSEKQKEGSDFIMRYLIDNKPD 101


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 86  PHLQHSLAWTW 54
           PH QH  AW W
Sbjct: 621 PHQQHLDAWYW 631


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = -2

Query: 84  PPTALPGLDMV 52
           PPTA  GLDMV
Sbjct: 435 PPTAQMGLDMV 445


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +1

Query: 319 SEKHEKGDKCVARIVAGSKPDGYDSGHESTPRTGKH 426
           +EKH++G + V R +  +KP  +    E     G++
Sbjct: 75  NEKHKEGVRKVIRHLIKNKPSWWQELQEKYDPKGEY 110


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 9/33 (27%), Positives = 15/33 (45%)
 Frame = -3

Query: 338 PFSCFSDRGSVVTTGGDTSKCKLDFSSLKYTPR 240
           P +   +R SV+ T     +CK     + Y P+
Sbjct: 49  PLAPAPERTSVLVTNNSDLRCKRKIQFMPYGPQ 81


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +1

Query: 529 SHGRTLKNTPQRNTNSTTDRSFCSWLRN 612
           S+    KN P  N N+T+ R+     RN
Sbjct: 384 SNNHWRKNNPNDNRNNTSSRAQGETSRN 411


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 176 SLRHPDGASDPNLR 217
           S  H DGAS P++R
Sbjct: 60  STSHTDGASTPDVR 73


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 176 SLRHPDGASDPNLR 217
           S  H DGAS P++R
Sbjct: 216 STSHTDGASTPDVR 229


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,035
Number of Sequences: 336
Number of extensions: 4239
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)