Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0916
         (676 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC064840-1|AAH64840.1|  954|Homo sapiens HDAC7A protein protein.       31   3.7  
AY321367-1|AAP84704.1|  915|Homo sapiens histone deacetylase 7A ...    31   3.7  
L09717-1|AAB41647.1|  410|Homo sapiens lysosomal membrane glycop...    31   4.9  
AY358217-1|AAQ88584.1|  357|Homo sapiens WNT9B protein.                31   4.9  
BC064534-1|AAH64534.1|  329|Homo sapiens WNT9B protein protein.        30   8.6  
AK127615-1|BAC87058.1|  329|Homo sapiens protein ( Homo sapiens ...    30   8.6  
AK127268-1|BAC86908.1|  351|Homo sapiens protein ( Homo sapiens ...    30   8.6  
AB063483-1|BAB70499.1|  357|Homo sapiens WNT14B protein.               30   8.6  

>BC064840-1|AAH64840.1|  954|Homo sapiens HDAC7A protein protein.
          Length = 954

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = -3

Query: 524 GSSSRDESKDDASESLGTES*PDSARLEVAAGLCFPVLGVDSCPLSYPSGFDPAT--ILA 351
           G SS ++S+   +  LG+E+  D  R     G   P+LG    PL  P G +P     L 
Sbjct: 247 GCSSPNDSEHGPNPILGSEADSDR-RTHPTLGPRGPILGSPHTPLFLPHGLEPEAGGTLP 305

Query: 350 THLSPFSCFSDRGS 309
           + L P       GS
Sbjct: 306 SRLQPILLLDPSGS 319


>AY321367-1|AAP84704.1|  915|Homo sapiens histone deacetylase 7A
           variant 3 protein.
          Length = 915

 Score = 31.1 bits (67), Expect = 3.7
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
 Frame = -3

Query: 524 GSSSRDESKDDASESLGTES*PDSARLEVAAGLCFPVLGVDSCPLSYPSGFDPAT--ILA 351
           G SS ++S+   +  LG+E+  D  R     G   P+LG    PL  P G +P     L 
Sbjct: 208 GCSSPNDSEHGPNPILGSEADSDR-RTHPTLGPRGPILGSPHTPLFLPHGLEPEAGGTLP 266

Query: 350 THLSPFSCFSDRGS 309
           + L P       GS
Sbjct: 267 SRLQPILLLDPSGS 280


>L09717-1|AAB41647.1|  410|Homo sapiens lysosomal membrane
           glycoprotein-2 protein.
          Length = 410

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 356 E*LPDRNRTDTIAGMNQLREPENTVRPPPRDEPNPAT 466
           E L D+++T T+A       P  T  P P+++P P T
Sbjct: 186 EFLCDKDKTSTVAPTIHTTVPSPTTTPTPKEKPEPGT 222


>AY358217-1|AAQ88584.1|  357|Homo sapiens WNT9B protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 4.9
 Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
 Frame = -3

Query: 206 GRMHHL--GVLEMRFLHQLCRCLCTFRMARS---SRCEIHLVRDKPHLQHSLAWTWFVCN 42
           GRM  L  G  E  FL+ +     T  +AR+    R E     D P L+   AW W VC 
Sbjct: 104 GRMGLLKRGFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCG 163

Query: 41  YHKSY 27
            +  Y
Sbjct: 164 DNLKY 168


>BC064534-1|AAH64534.1|  329|Homo sapiens WNT9B protein protein.
          Length = 329

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -3

Query: 188 GVLEMRFLHQLCRCLCTFRMARS---SRCEIHLVRDKPHLQHSLAWTWFVCNYHKSY 27
           G  E  FL+ +     T  +AR+    R E     D P L+   AW W VC  +  Y
Sbjct: 112 GFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCGDNLKY 168


>AK127615-1|BAC87058.1|  329|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45713 fis, clone FEKID2002493, moderately
           similar to WNT-14 protein precursor. ).
          Length = 329

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -3

Query: 188 GVLEMRFLHQLCRCLCTFRMARS---SRCEIHLVRDKPHLQHSLAWTWFVCNYHKSY 27
           G  E  FL+ +     T  +AR+    R E     D P L+   AW W VC  +  Y
Sbjct: 112 GFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCGDNLKY 168


>AK127268-1|BAC86908.1|  351|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45335 fis, clone BRHIP3007424, moderately
           similar to WNT-14 protein precursor. ).
          Length = 351

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -3

Query: 188 GVLEMRFLHQLCRCLCTFRMARS---SRCEIHLVRDKPHLQHSLAWTWFVCNYHKSY 27
           G  E  FL+ +     T  +AR+    R E     D P L+   AW W VC  +  Y
Sbjct: 106 GFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCGDNLKY 162


>AB063483-1|BAB70499.1|  357|Homo sapiens WNT14B protein.
          Length = 357

 Score = 29.9 bits (64), Expect = 8.6
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
 Frame = -3

Query: 188 GVLEMRFLHQLCRCLCTFRMARS---SRCEIHLVRDKPHLQHSLAWTWFVCNYHKSY 27
           G  E  FL+ +     T  +AR+    R E     D P L+   AW W VC  +  Y
Sbjct: 112 GFKETAFLYAVSSAALTHTLARACSAGRMERCTCDDSPGLESRQAWQWGVCGDNLKY 168


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,459,736
Number of Sequences: 237096
Number of extensions: 2535415
Number of successful extensions: 11224
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11217
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)