Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0916
(676 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g35760.1 68417.m05076 expressed protein 30 1.6
At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7) 29 2.1
At1g63260.1 68414.m07152 senescence-associated family protein si... 29 2.1
At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) / beta-fruc... 29 2.8
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664... 29 3.8
At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-contain... 29 3.8
At1g09050.1 68414.m01009 expressed protein 28 5.0
At3g44670.1 68416.m04804 disease resistance protein RPP1-Ws[A,C]... 28 6.6
At1g53060.1 68414.m06008 legume lectin family protein 28 6.6
At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein co... 27 8.7
At5g35370.1 68418.m04204 lectin protein kinase family protein co... 27 8.7
At3g53640.1 68416.m05925 protein kinase family protein contains ... 27 8.7
At3g13784.1 68416.m01741 beta-fructosidase, putative / beta-fruc... 27 8.7
At3g06710.1 68416.m00794 expressed protein 27 8.7
At2g15640.1 68415.m01791 F-box family protein contains Pfam PF00... 27 8.7
At1g29740.1 68414.m03636 leucine-rich repeat family protein / pr... 27 8.7
>At4g35760.1 68417.m05076 expressed protein
Length = 376
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +1
Query: 283 EVSPPVVTTEPRSEKHEKGDKCVARIVAGSKPDGYDSGHESTPRTGKHSPAATSRRAES 459
EVSPP VT+ PR + E D+ I ++G +S P S ++TS + S
Sbjct: 19 EVSPPSVTSYPR--RFEVSDRRFPAIPIKCSSSEPENGEDSAPSLSSSSSSSTSEVSTS 75
>At5g65390.1 68418.m08224 arabinogalactan-protein (AGP7)
Length = 130
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/80 (33%), Positives = 34/80 (42%)
Frame = +2
Query: 416 PENTVRPPPRDEPNPATTLFQETQTRHPWTHPD*TSRSRTGAR*KTHHSEIQTAQPIVHS 595
P TV PPP P PA T T T P P TS + A + S+ TA P +
Sbjct: 28 PTTTVTPPPVATPPPAATP-APTTTPPPAVSPAPTSSPPSSA--PSPSSDAPTASP--PA 82
Query: 596 ARG*GIVHVQIRLTPIQKSA 655
G G+ ++ TP SA
Sbjct: 83 PEGPGVSPGELAPTPSDASA 102
>At1g63260.1 68414.m07152 senescence-associated family protein
similar to senescence-associated protein 5 [Hemerocallis
hybrid cultivar] gi|3551954|gb|AAC34855
Length = 284
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -1
Query: 175 CDSCISYVVASVPFEWPVAVVVRSIWFV--ISPTYSTPWPGHGSFATITNLI 26
CDSC + V + EW + + + FV IS ST + SF + L+
Sbjct: 214 CDSCKAGVAQYMKTEWRLVAIFNVVLFVVLISSLLSTRFDSEQSFGLLNGLV 265
>At3g13790.1 68416.m01742 beta-fructosidase (BFRUCT1) /
beta-fructofuranosidase / cell wall invertase identical
to beta-fructofuranosidase GI:402740 from [Arabidopsis
thaliana]
Length = 584
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 128 PFERYRGNDITDARIASLRHPDGASDPNLREEKRIPGN 241
P Y G D + ++ ++ P SDP LRE K+ P N
Sbjct: 137 PVILYTGIDPKNQQVQNIAEPKNLSDPYLREWKKSPLN 174
>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
Protein of unknown function (DUF810)
Length = 985
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = -1
Query: 457 IRLVSRWRPDCVFRFSELIHARYRIR----PVSIRQLFWLRIYRPFHVSRIEVRLSQLEG 290
+ + S+W P+C+ + L+H Y R P+S++Q I F + IE +SQL G
Sbjct: 543 VPVFSKWLPECMMISAMLLHRFYGERLEWEPLSVQQRHAASIVEIFRI--IEETVSQLFG 600
>At2g30880.1 68415.m03763 pleckstrin homology (PH) domain-containing
protein contains Pfam profile PF00169: PH domain
Length = 504
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +2
Query: 26 DKICDSCKRTMSRPGSAVGGAYHEPDGSHNDCYGPFERYRGNDI--TDARIASLRHPDGA 199
DK C S RT S PG V H + + P NDI T+AR++ +R
Sbjct: 414 DKACLSISRTASIPGENV---VHMSEEQVVNAQPPVGENEWNDIQATEARVSDVREISAE 470
Query: 200 SDPNLREEKRIP 235
++ + R IP
Sbjct: 471 TERDRRNSLDIP 482
>At1g09050.1 68414.m01009 expressed protein
Length = 916
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
Frame = +1
Query: 220 RKTNTRKRGVYFKELKS--NLHLEVSPPVVTTEPRSEKHEKGDKCVARIVAGSKPDGYDS 393
R+ +TRKR + + L++ + L TT+P KHE K A ++ D
Sbjct: 787 RRQSTRKRPLTTRALEALESDFLITKRMKSTTKPEPRKHESSTKKKRSAKACNRNGSADL 846
Query: 394 GHESTPRTGKHSPAATSRRAESGYDSVP 477
H R+ + TS+ + DS P
Sbjct: 847 EHRGEDRSSFTKKSPTSKPLDQIEDSKP 874
>At3g44670.1 68416.m04804 disease resistance protein
RPP1-Ws[A,C]-like (TIR-NBS-LRR class), putative domain
signature TIR-NBS-LRR exists, suggestive of a disease
resistance protein. Closest Col-0 homolog to both RPP1
Ws-A and RPP1 Ws-C
Length = 872
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 332 SCFSDRGSVVTTGGDTSKCKLDFSSLKYTPRFRVFVFLL 216
+CF+ R T GD+ K KL SSL T RF+ + L+
Sbjct: 669 ACFNHRA----TSGDSLKIKLKESSLPTTLRFKACIMLV 703
>At1g53060.1 68414.m06008 legume lectin family protein
Length = 242
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 106 SIWFVISPTYSTPWPGHG-SFATITN 32
S +FVISP P PGHG +F + N
Sbjct: 59 SFYFVISPRPKNPNPGHGLAFIIVPN 84
>At5g50380.1 68418.m06240 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 683
Score = 27.5 bits (58), Expect = 8.7
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 41 SCKRTMSRPGSAVGGAYHEPDGSHNDCYGPFERYRGNDITDARIASLRHPDGASDPNLRE 220
S R S GS+ G + +++ ER+RG + + + L+ DP LRE
Sbjct: 560 SALRDESMGGSSSGSPSYGQRSNNSSKMALKERFRGFNASFEELYRLQTAWKVPDPQLRE 619
Query: 221 EKRI 232
E RI
Sbjct: 620 ELRI 623
>At5g35370.1 68418.m04204 lectin protein kinase family protein
contains Pfam domains, PF01453: Lectin (probable mannose
binding) and PF00069: Protein kinase domain
Length = 870
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -3
Query: 497 DDASESLGTES*PDSARLEVAAGLCFPVLGVDSCPLS 387
D+ASE+ S PD R++ G+C PV S P+S
Sbjct: 300 DNASENQSC-SCPDEMRMDAGKGVCVPVSQSLSLPVS 335
>At3g53640.1 68416.m05925 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 642
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 8 RAYRPSDKICDSCKRTMSRPGSAVGGAYHEPDGSHNDCYGPFERYRGND 154
R+Y PSD++ S KR + + DG+ + Y PF GND
Sbjct: 16 RSYSPSDEVVKSSKRHKHHHHKHRHSHHLDEDGNEKNVY-PFLGNPGND 63
>At3g13784.1 68416.m01741 beta-fructosidase, putative /
beta-fructofuranosidase, putative / cell wall invertase,
putative similar to beta-fructofuranosidase GI:402740
from [Arabidopsis thaliana]
Length = 569
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +2
Query: 128 PFERYRGNDITDARIASLRHPDGASDPNLREEKRIPGNGACT 253
P Y GND + ++ +L P +DP LR + P N T
Sbjct: 127 PVILYTGNDRYNRQVQNLVKPKNLTDPYLRHWTKSPENPLVT 168
>At3g06710.1 68416.m00794 expressed protein
Length = 302
Score = 27.5 bits (58), Expect = 8.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 139 PFEWPVAVVVRSIWFVISPTY 77
PF WP + + ++WF+ TY
Sbjct: 264 PFIWPALLALIAVWFMAKQTY 284
>At2g15640.1 68415.m01791 F-box family protein contains Pfam
PF00646: F-box domain; contains TIGRFAM TIGR01640 :
F-box protein interaction domain
Length = 426
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 305 VTTGGDTSKCKLDFSSLKYTPRFRVFVF 222
V+ G T+ ++ FS LKYTP+ +VF
Sbjct: 338 VSIAGGTASGEIVFSMLKYTPKQPFYVF 365
>At1g29740.1 68414.m03636 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 1049
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 172 DSCISYVVASVPFEWPVAVVVRSIWFVISPTYSTPWPGHGSFATITNL 29
D C +Y+ S+P EW ++SI + G G F +T L
Sbjct: 128 DLCRNYLYGSIPMEWASLPYLKSISVCANRLTGDIPKGLGKFINLTQL 175
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,282,456
Number of Sequences: 28952
Number of extensions: 371848
Number of successful extensions: 1267
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1265
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1432596384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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