Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0915
         (674 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    25   0.75 
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    24   1.3  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    24   1.3  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    24   1.3  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    22   5.3  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = +3

Query: 168 VYTHHFTKALFHP 206
           VYTH+F K +F+P
Sbjct: 129 VYTHNFVKDIFYP 141


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 138 TSKKITEKGSVYTHHFTKALFHPISCR 218
           TS       +   HHFTK  F  I C+
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 138 TSKKITEKGSVYTHHFTKALFHPISCR 218
           TS       +   HHFTK  F  I C+
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = +3

Query: 138 TSKKITEKGSVYTHHFTKALFHPISCR 218
           TS       +   HHFTK  F  I C+
Sbjct: 28  TSSPAGRSPAFLPHHFTKRSFFDIQCK 54


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -1

Query: 530 NMSTFYIXLTRFNKK 486
           N++TF+I + +FN K
Sbjct: 332 NVTTFFIIIIQFNNK 346


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,353
Number of Sequences: 336
Number of extensions: 2492
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)