Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0915
(674 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-... 32 1.6
M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule m... 32 1.6
Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-2|CAI23059.1| 644|Homo sapiens selectin P (granule membr... 32 2.1
Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membr... 32 2.1
BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule mem... 32 2.1
BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein. 32 2.1
AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-2|CAI22754.1| 644|Homo sapiens selectin P (granule mem... 32 2.1
AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule mem... 32 2.1
AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule mem... 32 2.1
>M60234-1|AAA35910.1| 830|Homo sapiens granule membrane protein-140
protein.
Length = 830
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMICLHSAKAFQHQSSCSF 290
>M25322-1|AAA35911.1| 830|Homo sapiens protein ( Human granule
membrane protein-140 mRNA, complete cds. ).
Length = 830
Score = 32.3 bits (70), Expect = 1.6
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMICLHSAKAFQHQSSCSF 290
>Z99572-8|CAI23064.1| 753|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 753
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 227 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 275
>Z99572-7|CAI23063.1| 829|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 829
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 241 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 289
>Z99572-6|CAI23062.1| 645|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 645
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 241 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 289
>Z99572-5|CAI23058.1| 830|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 830
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>Z99572-4|CAI23060.1| 646|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 646
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>Z99572-2|CAI23059.1| 644|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>Z99572-1|CAI23061.1| 768|Homo sapiens selectin P (granule membrane
protein 140kDa, antigen CD62) protein.
Length = 768
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>BC068533-1|AAH68533.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>BC028067-1|AAH28067.2| 789|Homo sapiens SELP protein protein.
Length = 789
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 241 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 289
>AL022146-8|CAI22758.1| 753|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 753
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 227 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 275
>AL022146-7|CAI22757.1| 829|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 829
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 241 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 289
>AL022146-6|CAI22756.1| 645|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 645
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 241 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 289
>AL022146-5|CAI22753.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>AL022146-4|CAI22755.1| 646|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 646
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>AL022146-2|CAI22754.1| 644|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 644
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>AL022146-1|CAI22751.1| 768|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 768
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
>AF542391-1|AAN06828.1| 830|Homo sapiens selectin P (granule
membrane protein 140kDa, antigen CD62) protein.
Length = 830
Score = 31.9 bits (69), Expect = 2.1
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +3
Query: 57 INCLASVKVHKVWENETKPPDVPSFLSTSKKITEKGSVYTHHFTKALFHPISCRF 221
+ CLAS +W N KPP + KI E+G++ H KA H SC F
Sbjct: 242 LECLAS----GIWTN--KPPQCLAAQCPPLKIPERGNMTCLHSAKAFQHQSSCSF 290
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,910,895
Number of Sequences: 237096
Number of extensions: 1273655
Number of successful extensions: 1654
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1654
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7615267504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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