BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0914 (659 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_Q9VVI1 Cluster: CG7564-PA; n=2; Eumetazoa|Rep: CG7564-P... 63 7e-09 UniRef50_UPI0000E469DC Cluster: PREDICTED: similar to CG7564-PA;... 57 4e-07 UniRef50_Q9Y383 Cluster: Putative RNA-binding protein Luc7-like ... 54 2e-06 UniRef50_Q09217 Cluster: Uncharacterized protein B0495.8; n=3; C... 42 0.017 UniRef50_Q9USM4 Cluster: U1 snRNP-associated protein Usp106; n=1... 38 0.28 >UniRef50_Q9VVI1 Cluster: CG7564-PA; n=2; Eumetazoa|Rep: CG7564-PA - Drosophila melanogaster (Fruit fly) Length = 420 Score = 62.9 bits (146), Expect = 7e-09 Identities = 30/42 (71%), Positives = 34/42 (80%) Frame = +1 Query: 289 VKATEHLXAFIADXDRRTTAXKQRLAETHEELSAEVTEKANA 414 ++A EHL AFIAD DRRT + KQRL ET EEL+AEV EKANA Sbjct: 89 IEAMEHLQAFIADCDRRTDSAKQRLKETQEELTAEVAEKANA 130 Score = 58.0 bits (134), Expect = 2e-07 Identities = 22/29 (75%), Positives = 27/29 (93%) Frame = +1 Query: 1 GECPKIHDLALRADYEIASKTKDYFYDID 87 GECPK+HDLA RADYE A+KT+DY+YDI+ Sbjct: 62 GECPKVHDLAFRADYESAAKTRDYYYDIE 90 Score = 43.6 bits (98), Expect = 0.004 Identities = 26/72 (36%), Positives = 36/72 (50%) Frame = +3 Query: 402 ESQCCHELXEQIGXKLARAXALGEXGMVXXSAN*WED*RTXXKRKLSPXKDXSXIPFPXS 581 ++ H L E+IG KLA+A ALGE G V S ++ +K+ + P S Sbjct: 127 KANAVHGLAEEIGKKLAKAEALGEAGEVEDSMELMKEIEELRAKKIKAEHEY-RTSMPAS 185 Query: 582 SXQQQKXLXCEV 617 + QQQK CEV Sbjct: 186 TYQQQKLRVCEV 197 >UniRef50_UPI0000E469DC Cluster: PREDICTED: similar to CG7564-PA; n=1; Strongylocentrotus purpuratus|Rep: PREDICTED: similar to CG7564-PA - Strongylocentrotus purpuratus Length = 472 Score = 56.8 bits (131), Expect = 4e-07 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%) Frame = +1 Query: 268 NKILLFYVKATEHLXAFIADXDRRTTAXKQRLAETHEELSAEVTEKANAAMNXQSK*GXN 447 NK +++ AT+HL +FIAD DRRT K+RL ET E LSAEV KA+ G Sbjct: 58 NKDFGYHIDATQHLQSFIADCDRRTENSKKRLLETQESLSAEVNHKADCVHEMAEMLGKK 117 Query: 448 WLGL-XHSEKXVWSMXVXINGKIDELXTKE 534 H E+ + + +++E+ K+ Sbjct: 118 IADAEKHGEEGDVEKSMEVMAEVEEIRQKK 147 Score = 42.7 bits (96), Expect = 0.008 Identities = 19/31 (61%), Positives = 22/31 (70%) Frame = +1 Query: 1 GECPKIHDLALRADYEIASKTKDYFYDIDVS 93 G C K HD ALRADYE A+K KD+ Y ID + Sbjct: 38 GACSKHHDPALRADYEQAAKNKDFGYHIDAT 68 Score = 41.1 bits (92), Expect = 0.023 Identities = 23/72 (31%), Positives = 36/72 (50%) Frame = +3 Query: 402 ESQCCHELXEQIGXKLARAXALGEXGMVXXSAN*WED*RTXXKRKLSPXKDXSXIPFPXS 581 ++ C HE+ E +G K+A A GE G V S + ++K++ ++ P S Sbjct: 103 KADCVHEMAEMLGKKIADAEKHGEEGDVEKSMEVMAEVEEIRQKKIAAEEELRN-SMPAS 161 Query: 582 SXQQQKXLXCEV 617 + QQQK CEV Sbjct: 162 TYQQQKLRVCEV 173 >UniRef50_Q9Y383 Cluster: Putative RNA-binding protein Luc7-like 2; n=97; Bilateria|Rep: Putative RNA-binding protein Luc7-like 2 - Homo sapiens (Human) Length = 392 Score = 54.4 bits (125), Expect = 2e-06 Identities = 26/42 (61%), Positives = 31/42 (73%) Frame = +1 Query: 283 FYVKATEHLXAFIADXDRRTTAXKQRLAETHEELSAEVTEKA 408 F + A +HL +FIAD DRRT K+RLAET EE+SAEV KA Sbjct: 82 FELDAMDHLQSFIADCDRRTEVAKKRLAETQEEISAEVAAKA 123 Score = 53.6 bits (123), Expect = 4e-06 Identities = 21/29 (72%), Positives = 27/29 (93%) Frame = +1 Query: 1 GECPKIHDLALRADYEIASKTKDYFYDID 87 GEC K+HDLALRADYEIASK +D+F+++D Sbjct: 57 GECLKVHDLALRADYEIASKEQDFFFELD 85 Score = 36.7 bits (81), Expect = 0.49 Identities = 24/67 (35%), Positives = 31/67 (46%) Frame = +3 Query: 417 HELXEQIGXKLARAXALGEXGMVXXSAN*WED*RTXXKRKLSPXKDXSXIPFPXSSXQQQ 596 HEL E+IG LA+ LG G V S ++ +K ++ P SS QQQ Sbjct: 127 HELNEEIGKLLAKVEQLGAEGNVEESQKVMDEVEKARAKK-REAEEVYRNSMPASSFQQQ 185 Query: 597 KXLXCEV 617 K CEV Sbjct: 186 KLRVCEV 192 >UniRef50_Q09217 Cluster: Uncharacterized protein B0495.8; n=3; Caenorhabditis|Rep: Uncharacterized protein B0495.8 - Caenorhabditis elegans Length = 313 Score = 41.5 bits (93), Expect = 0.017 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = +1 Query: 7 CPKIHDLALRADYEIASKTKDYFYDID 87 C K+H+ A +ADYE A K KD+FYD+D Sbjct: 58 CRKVHEPAHKADYERAQKEKDHFYDVD 84 >UniRef50_Q9USM4 Cluster: U1 snRNP-associated protein Usp106; n=1; Schizosaccharomyces pombe|Rep: U1 snRNP-associated protein Usp106 - Schizosaccharomyces pombe (Fission yeast) Length = 264 Score = 37.5 bits (83), Expect = 0.28 Identities = 16/29 (55%), Positives = 20/29 (68%) Frame = +1 Query: 1 GECPKIHDLALRADYEIASKTKDYFYDID 87 G CPKIH L++DYE AS + DY Y+ D Sbjct: 55 GPCPKIHSDKLKSDYERASYSHDYGYEWD 83 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 455,088,163 Number of Sequences: 1657284 Number of extensions: 6500719 Number of successful extensions: 12180 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 11919 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12178 length of database: 575,637,011 effective HSP length: 98 effective length of database: 413,223,179 effective search space used: 50000004659 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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