Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0914
         (659 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p pro...    63   4e-10
AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA...    63   4e-10

>BT021417-1|AAX33565.1|  420|Drosophila melanogaster LD04387p
           protein.
          Length = 420

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +1

Query: 289 VKATEHLXAFIADXDRRTTAXKQRLAETHEELSAEVTEKANA 414
           ++A EHL AFIAD DRRT + KQRL ET EEL+AEV EKANA
Sbjct: 89  IEAMEHLQAFIADCDRRTDSAKQRLKETQEELTAEVAEKANA 130



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   GECPKIHDLALRADYEIASKTKDYFYDID 87
           GECPK+HDLA RADYE A+KT+DY+YDI+
Sbjct: 62  GECPKVHDLAFRADYESAAKTRDYYYDIE 90



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +3

Query: 402 ESQCCHELXEQIGXKLARAXALGEXGMVXXSAN*WED*RTXXKRKLSPXKDXSXIPFPXS 581
           ++   H L E+IG KLA+A ALGE G V  S    ++      +K+    +      P S
Sbjct: 127 KANAVHGLAEEIGKKLAKAEALGEAGEVEDSMELMKEIEELRAKKIKAEHEY-RTSMPAS 185

Query: 582 SXQQQKXLXCEV 617
           + QQQK   CEV
Sbjct: 186 TYQQQKLRVCEV 197


>AE014296-2922|AAF49330.1|  420|Drosophila melanogaster CG7564-PA
           protein.
          Length = 420

 Score = 62.9 bits (146), Expect = 4e-10
 Identities = 30/42 (71%), Positives = 34/42 (80%)
 Frame = +1

Query: 289 VKATEHLXAFIADXDRRTTAXKQRLAETHEELSAEVTEKANA 414
           ++A EHL AFIAD DRRT + KQRL ET EEL+AEV EKANA
Sbjct: 89  IEAMEHLQAFIADCDRRTDSAKQRLKETQEELTAEVAEKANA 130



 Score = 58.0 bits (134), Expect = 1e-08
 Identities = 22/29 (75%), Positives = 27/29 (93%)
 Frame = +1

Query: 1   GECPKIHDLALRADYEIASKTKDYFYDID 87
           GECPK+HDLA RADYE A+KT+DY+YDI+
Sbjct: 62  GECPKVHDLAFRADYESAAKTRDYYYDIE 90



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 26/72 (36%), Positives = 36/72 (50%)
 Frame = +3

Query: 402 ESQCCHELXEQIGXKLARAXALGEXGMVXXSAN*WED*RTXXKRKLSPXKDXSXIPFPXS 581
           ++   H L E+IG KLA+A ALGE G V  S    ++      +K+    +      P S
Sbjct: 127 KANAVHGLAEEIGKKLAKAEALGEAGEVEDSMELMKEIEELRAKKIKAEHEY-RTSMPAS 185

Query: 582 SXQQQKXLXCEV 617
           + QQQK   CEV
Sbjct: 186 TYQQQKLRVCEV 197


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,419,992
Number of Sequences: 53049
Number of extensions: 299252
Number of successful extensions: 500
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2827453950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)