Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0911
         (678 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV083...    33   4.8  

>UniRef50_Q7P568 Cluster: Putative uncharacterized protein FNV0838;
           n=1; Fusobacterium nucleatum subsp. vincentii ATCC
           49256|Rep: Putative uncharacterized protein FNV0838 -
           Fusobacterium nucleatum subsp. vincentii ATCC 49256
          Length = 272

 Score = 33.5 bits (73), Expect = 4.8
 Identities = 23/73 (31%), Positives = 38/73 (52%)
 Frame = -3

Query: 535 YLKCLKSYFNLKL*LYTVSRIXYFRIL*NMFYYVLKRIEP*IIFS*XILF*PSSFPLIFN 356
           + K  K+  N KL  Y +S +     L N FYY+ ++    ++F   +LF    F L+++
Sbjct: 51  FYKLNKNINNFKLNFYFLSSLILNFFLINYFYYLGEKYIEILLFLSLLLF----FILVYS 106

Query: 355 FIYFKIQ*GLKYF 317
           F+ F I+  L YF
Sbjct: 107 FLLFLIEEDLFYF 119


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 485,285,416
Number of Sequences: 1657284
Number of extensions: 7778716
Number of successful extensions: 12487
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 12149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12485
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 52479343733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)