Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0907
         (673 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    25   0.75 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   3.0  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   3.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   6.9  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   6.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   6.9  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.2  

>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -1

Query: 187 GHRWRDDGRQEIVRSKRQSEVLIAKAVRLVSQDEWQQR 74
           GH W+ D  +E VR++ Q   L   A  +   D+ ++R
Sbjct: 117 GHEWQADVSEEAVRARMQD--LTEGAKNMTINDDLEKR 152


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 504 GSRSPGSDHGQH 469
           G+RSPG DH ++
Sbjct: 14  GARSPGGDHSEN 25


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = +1

Query: 64  SKNVSAAIHPGIPTEPPSRSGLRTGAYSGRSP 159
           S NV AA HP +   P +    +    S +SP
Sbjct: 21  SMNVKAAEHPSLRGTPLAMLAAQCNKLSNKSP 52


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 259 KDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYA 414
           KD ++   D++   P+   + +  G   V G+ EE+  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 140 APVRSPDREGGSVGIPG*MA 81
           AP++ P REG     PG +A
Sbjct: 436 APIKGPGREGFYTQNPGFLA 455


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 648 PHGYTFLIHKRSEESLXCFGCSQLPQWAP 562
           PH  TF + K +   +  F   + PQ+ P
Sbjct: 363 PHERTFTVEKDTMVMISMFAIHRDPQYFP 391


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 244 HHHLNKDKFQVNLD 285
           HH L+++K+Q+ +D
Sbjct: 128 HHFLHENKYQLEVD 141


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 244 HHHLNKDKFQVNLD 285
           HH L+++K+Q+ +D
Sbjct: 128 HHFLHENKYQLEVD 141


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 244 HHHLNKDKFQVNLD 285
           HH L+++K+Q+ +D
Sbjct: 128 HHFLHENKYQLEVD 141


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -1

Query: 247 GGTDVSIGHRHLL 209
           GG  VS  HRHLL
Sbjct: 325 GGALVSAKHRHLL 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,439
Number of Sequences: 336
Number of extensions: 2765
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)