Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0901
         (674 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   2.9  
AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical prote...    24   5.0  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 416 GSSCYTLIYCTSET*YLRKRGW 351
           G SCY L+  T +  YL+ RG+
Sbjct: 580 GESCYRLMSRTGDFIYLKTRGY 601


>AJ302660-1|CAC35525.1|  195|Anopheles gambiae hypothetical protein
           protein.
          Length = 195

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 304 VEPLLAKPVLAHLSWSNGKASGPTKVLSS 218
           ++PLLA P+   L WS    S  T  L++
Sbjct: 18  LQPLLAAPIFWFLPWSFPALSPTTTTLAT 46


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -1

Query: 299 ASPG*ARARPPILVKWKGLRANKSPFFI 216
           A+PG  +ARPP   +  G  + +SP  +
Sbjct: 547 ATPGGTKARPPSAQQVDGRESVRSPLTV 574


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,771
Number of Sequences: 2352
Number of extensions: 12724
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)