Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0894
(673 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic... 26 4.3
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc... 26 4.3
SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr 2... 26 4.3
SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide mc... 26 5.7
SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide mc... 26 5.7
SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 7.5
SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr 1|... 25 7.5
SPCC1442.02 ||SPCC1450.18|DUF1760 family protein|Schizosaccharom... 25 7.5
SPAC5H10.05c |||FAD binding oxidoreductasde |Schizosaccharomyces... 25 7.5
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 25 9.9
SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces... 25 9.9
>SPBC19G7.05c |bgs1|cps1, drc1|1,3-beta-glucan synthase catalytic
subunit Bgs1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1729
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 638 SFLKYCEWIGFLTVSSIKSYTF-NLNLTLQLRVI 540
+F+ +C WI L ++SY F LNL +R +
Sbjct: 502 AFVSWCLWITVLVAKFLESYFFLTLNLADSIRFL 535
>SPCP1E11.04c |pal1||membrane associated protein Pal1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 425
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 6 RAEPKPTSPARGAPCRPTNEALARR 80
+ EP P S A +P + + EALA R
Sbjct: 62 KKEPSPASSASASPVKKSAEALAER 86
>SPBC1198.08 |||dipeptidase Dug1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 474
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +3
Query: 282 KALGVDFILIVIICVNVSPKYGSDTLINL 368
K LG+DF + +++C +YGS+ L +L
Sbjct: 147 KELGIDFPVNLLMCFEGMEEYGSEGLEDL 175
>SPBC23G7.09 |matmc_2|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 559 LYSYELSNESPHQNPRLHGIAPTITKRFKSTVLKSXXXXXIDNDSRIAGVLWRNVDTRDL 380
L S S + PR K +T+LKS S++ G +WRN +++++
Sbjct: 90 LKSLRKDTTSTERTPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRN-ESKEV 148
Query: 379 R 377
R
Sbjct: 149 R 149
>SPBC1711.02 |matmc_1|matmc|mating-type m-specific polypeptide
mc|Schizosaccharomyces pombe|chr 2|||Manual
Length = 181
Score = 25.8 bits (54), Expect = 5.7
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = -1
Query: 559 LYSYELSNESPHQNPRLHGIAPTITKRFKSTVLKSXXXXXIDNDSRIAGVLWRNVDTRDL 380
L S S + PR K +T+LKS S++ G +WRN +++++
Sbjct: 90 LKSLRKDTTSTERTPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRN-ESKEV 148
Query: 379 R 377
R
Sbjct: 149 R 149
>SPAC821.03c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 485
Score = 25.4 bits (53), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 601 VKNPIHSQYFKKDLSGKALSIRH 669
++NPI S YF +DLS S H
Sbjct: 5 IQNPIESSYFVEDLSAVGNSQLH 27
>SPAC1B1.02c |||NAD/NADH kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 537
Score = 25.4 bits (53), Expect = 7.5
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +1
Query: 520 FDEATHSITRSCKVRLRL 573
FD HS++ SCK+ L L
Sbjct: 99 FDRVKHSVSNSCKLHLSL 116
>SPCC1442.02 ||SPCC1450.18|DUF1760 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 562
Score = 25.4 bits (53), Expect = 7.5
Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = -1
Query: 589 LSPIHSTLI*LYSYELSN-ESPHQNPRLH 506
LS IH TL+ LYS E+ N S +Q P ++
Sbjct: 502 LSYIHQTLVFLYSLEIQNLLSQNQFPTVY 530
>SPAC5H10.05c |||FAD binding oxidoreductasde |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 196
Score = 25.4 bits (53), Expect = 7.5
Identities = 12/51 (23%), Positives = 22/51 (43%)
Frame = -1
Query: 547 ELSNESPHQNPRLHGIAPTITKRFKSTVLKSXXXXXIDNDSRIAGVLWRNV 395
E ++ N LH +A + TV ++ D ++ + +LW NV
Sbjct: 11 EFAHSQGKFNKTLHNVAKDTLIQLGHTVQETVVDEGYDENTEVEKILWANV 61
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.0 bits (52), Expect = 9.9
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +1
Query: 7 ELSQSQPLLHAAHPADQQTR 66
+LS+ P LH++ P+D ++R
Sbjct: 547 DLSKKHPALHSSRPSDSRSR 566
>SPCP31B10.02 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 143
Score = 25.0 bits (52), Expect = 9.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -3
Query: 101 DGGSVTTTPRQSLVCWSAGCAAC 33
DG V P + L C +GCA C
Sbjct: 50 DGIRVPPKPEEPLNCCQSGCAIC 72
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,625,168
Number of Sequences: 5004
Number of extensions: 49702
Number of successful extensions: 107
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 307866294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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