Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0893
(678 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 26 0.25
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 26 0.25
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 25 0.75
AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 25 0.75
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.3
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.3
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 24 1.3
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 1.7
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 1.7
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 1.7
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 22 4.0
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 5.3
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 5.3
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 7.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 21 9.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 9.3
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 9.3
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 255 FGQIHQHLLKN-DPNPTQQTPLSTIT 329
F ++ + KN DPNPT++ PL +T
Sbjct: 464 FVKLWTNFAKNGDPNPTEENPLINVT 489
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 26.2 bits (55), Expect = 0.25
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +3
Query: 255 FGQIHQHLLKN-DPNPTQQTPLSTIT 329
F ++ + KN DPNPT++ PL +T
Sbjct: 464 FVKLWTNFAKNGDPNPTEENPLINVT 489
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 24.6 bits (51), Expect = 0.75
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 255 FGQIHQHLLKN-DPNPTQQTPLSTIT 329
F ++ KN DPNP ++TPL +T
Sbjct: 464 FVKLWTSFAKNGDPNPKEKTPLINVT 489
>AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant
transcription factor TcDfd1 protein.
Length = 126
Score = 24.6 bits (51), Expect = 0.75
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Frame = +1
Query: 31 PEIKLRRPPPMHHKVNPYPL----PMPNP 105
P++ PP+HH++ P L PM NP
Sbjct: 87 PQLHSHHGPPIHHQIRPPILHDTQPMCNP 115
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 43 LRRPPPMHHKVNPYPLPMPNPHNSHGMKKP 132
L +PPP H + PY L S G+ +P
Sbjct: 134 LSQPPPAHMGIPPYQLDSKTA-GSMGLTRP 162
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 43 LRRPPPMHHKVNPYPLPMPNPHNS 114
L RPP YP P+ +P S
Sbjct: 159 LTRPPMYPFPAGQYPYPILSPEMS 182
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 43 LRRPPPMHHKVNPYPLPMPNPHNSHGMKKP 132
L +PPP H + PY L S G+ +P
Sbjct: 26 LSQPPPAHMGIPPYQLDSKTA-GSMGLTRP 54
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +1
Query: 43 LRRPPPMHHKVNPYPLPMPNPHNS 114
L RPP YP P+ +P S
Sbjct: 51 LTRPPMYPFPAGQYPYPILSPEMS 74
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 23.8 bits (49), Expect = 1.3
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 255 FGQIHQHLLKN-DPNPTQQTPLSTIT 329
F ++ + KN DPNP ++TP +T
Sbjct: 463 FVKLWTNFAKNGDPNPKEKTPFINVT 488
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 23.4 bits (48), Expect = 1.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 31 PEIKLRRPPPMHHKVNP 81
P++ PP+HH++ P
Sbjct: 87 PQLHSHHGPPIHHQIRP 103
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 31 PEIKLRRPPPMHHKVNP 81
P++ PP+HH++ P
Sbjct: 87 PQLHSHHGPPIHHQIRP 103
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 23.4 bits (48), Expect = 1.7
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +1
Query: 31 PEIKLRRPPPMHHKVNP 81
P++ PP+HH++ P
Sbjct: 87 PQLHSHHGPPIHHQIRP 103
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 22.2 bits (45), Expect = 4.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = -2
Query: 434 SDLTFDHLVNNNITLPYTQSLHWQVHIIWTVF 339
S L FD+ V N Y Q L I +TVF
Sbjct: 145 SYLLFDYFVQRNQEYKYYQILSHLSGIFFTVF 176
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 297 PTQQTPLSTITANNKHGPNNM 359
PT PL+T + NN H ++M
Sbjct: 151 PTGSPPLTTQSMNNHHMGHHM 171
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 297 PTQQTPLSTITANNKHGPNNM 359
PT PL+T + NN H ++M
Sbjct: 153 PTGSPPLTTQSMNNHHMGHHM 173
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 230 ENVFIGGTLGSRGR 189
E+VFIGGT G R
Sbjct: 164 EDVFIGGTTGKLRR 177
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = +3
Query: 267 HQHLLKNDPNPTQQTPLSTITANNKHGPNNMHLP 368
H HL + P + + N +GP+ ++ P
Sbjct: 273 HWHLTDSQSFPLVSQRVPQLAKNGAYGPDMIYTP 306
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 NNMHLPVQTLSVGQ-SDIIVNQVVKSQITLPGSNDAIAQHSIPQPY 485
N + L + + S G SD I N I +PG + I P+PY
Sbjct: 154 NQLDLVLNSESGGDLSDFITNGEWYL-IGMPGKKNTIVYACCPEPY 198
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 NNMHLPVQTLSVGQ-SDIIVNQVVKSQITLPGSNDAIAQHSIPQPY 485
N + L + + S G SD I N I +PG + I P+PY
Sbjct: 154 NQLDLVLNSESGGDLSDFITNGEWYL-IGMPGKKNTIVYACCPEPY 198
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 NNMHLPVQTLSVGQ-SDIIVNQVVKSQITLPGSNDAIAQHSIPQPY 485
N + L + + S G SD I N I +PG + I P+PY
Sbjct: 154 NQLDLVLNSESGGDLSDFITNGEWYL-IGMPGKKNTIVYACCPEPY 198
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 NNMHLPVQTLSVGQ-SDIIVNQVVKSQITLPGSNDAIAQHSIPQPY 485
N + L + + S G SD I N I +PG + I P+PY
Sbjct: 154 NQLDLVLNSESGGDLSDFITNGEWYL-IGMPGKKNTIVYACCPEPY 198
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 9.3
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 351 NNMHLPVQTLSVGQ-SDIIVNQVVKSQITLPGSNDAIAQHSIPQPY 485
N + L + + S G SD I N I +PG + I P+PY
Sbjct: 154 NQLDLVLNSESGGDLSDFITNGEWYL-IGMPGKKNTIVYACCPEPY 198
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 21.0 bits (42), Expect = 9.3
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +1
Query: 505 FWEAYGTPCSFRPTNDSNQTTRHKDTXN 588
F++ Y T D NQ T H T N
Sbjct: 15 FYQNYKTNPFLASDCDKNQNTEHNYTHN 42
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,419
Number of Sequences: 336
Number of extensions: 3607
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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