Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0893
(678 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein. 28 0.31
U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein. 28 0.31
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 27 0.72
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 2.2
AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein hom... 25 2.9
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 24 5.1
AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14... 24 5.1
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 8.9
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 8.9
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 8.9
>U42429-1|AAB54088.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.9 bits (59), Expect = 0.31
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 PMHHKVNPYPLPMPN-PHNSHG-MKKPSPSAQP 150
P HH +P+ +P+ PH+ H ++PSP P
Sbjct: 91 PPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSP 123
>U42214-1|AAB58461.1| 596|Anopheles gambiae engrailed protein.
Length = 596
Score = 27.9 bits (59), Expect = 0.31
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +1
Query: 58 PMHHKVNPYPLPMPN-PHNSHG-MKKPSPSAQP 150
P HH +P+ +P+ PH+ H ++PSP P
Sbjct: 91 PPHHHQHPHHHQLPHHPHHQHHPQQQPSPQTSP 123
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 26.6 bits (56), Expect = 0.72
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLP--MPNPHNSHGMKKPSPSAQP 150
P PP + + P M P P P P ++ GM++P QP
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQP 263
Score = 25.4 bits (53), Expect = 1.7
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
Frame = +1
Query: 1 RHEHFRRPAP---PEIKLRRPPPMHHKVNPYPL--PMPNPHNSHG--MKKPSPSAQP 150
+H H R P P RPPP+ H+ P+ + PNP G M +P + P
Sbjct: 144 QHPHQRDTGPALFPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGP 200
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 2.2
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 43 LRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSP 138
L P P HH +P+ P+ + PSP
Sbjct: 714 LASPSPHHHLTSPHGAPLALTSSKSASTHPSP 745
>AF119382-1|AAD27585.1| 394|Anopheles gambiae caudal protein
homolog protein.
Length = 394
Score = 24.6 bits (51), Expect = 2.9
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 70 KVNPYPLPMPNPHNSHGMKKPSPSAQPN 153
++ P P P+ +P+ MKK S +QPN
Sbjct: 183 QITPRPTPVKSPYE--WMKKQSYQSQPN 208
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.8 bits (49), Expect = 5.1
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + RPPPM + P M P GM+ P SA P
Sbjct: 108 PLPPPMMGMRPPPM---MVP---TMGMPPMGLGMRPPVMSAAP 144
>AF007166-1|AAB62929.1| 360|Anopheles gambiae serine protease 14D
protein.
Length = 360
Score = 23.8 bits (49), Expect = 5.1
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 367 GKCILFGPCLLLAVIVDKGVCCVGLGSFLSRCWC 266
GKC+LF C L I +K V FL+ C
Sbjct: 39 GKCVLFRECQPLVDIYNKPVNTPDDTQFLTESRC 72
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 23.0 bits (47), Expect = 8.9
Identities = 5/19 (26%), Positives = 13/19 (68%)
Frame = +3
Query: 474 PQPYHKSGQIILGSLWNTL 530
P+P H+ + G++W+++
Sbjct: 1633 PEPSHRRNHTLFGNVWSSI 1651
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 23.0 bits (47), Expect = 8.9
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +1
Query: 52 PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
PP + + P +P P ++ +P+P+ P
Sbjct: 630 PPSAYQQQQPPVVPPPRTNSQSQASEPTPALPP 662
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 8.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -1
Query: 171 IIRLLMVWLCRWTWL 127
+I + VW C W WL
Sbjct: 781 MIDIFCVWDCCWVWL 795
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 690,279
Number of Sequences: 2352
Number of extensions: 14580
Number of successful extensions: 36
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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