Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0893
(678 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g06640.1 68418.m00750 proline-rich extensin-like family prote... 34 0.075
At5g19090.2 68418.m02270 heavy-metal-associated domain-containin... 33 0.17
At5g19090.1 68418.m02269 heavy-metal-associated domain-containin... 33 0.17
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 33 0.17
At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family... 33 0.23
At1g31810.1 68414.m03904 formin homology 2 domain-containing pro... 32 0.30
At3g16510.1 68416.m02107 C2 domain-containing protein contains s... 31 0.53
At1g26150.1 68414.m03192 protein kinase family protein similar t... 31 0.53
At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associa... 31 0.70
At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associa... 31 0.70
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 31 0.70
At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00... 31 0.70
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 31 0.93
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 31 0.93
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 31 0.93
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 30 1.2
At5g56890.1 68418.m07099 protein kinase family protein contains ... 30 1.2
At1g75240.1 68414.m08741 zinc finger homeobox family protein / Z... 30 1.2
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 30 1.2
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.2
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 30 1.6
At3g19320.1 68416.m02450 leucine-rich repeat family protein cont... 30 1.6
At3g15000.1 68416.m01897 expressed protein similar to DAG protei... 30 1.6
At5g13760.1 68418.m01604 expressed protein similar to unknown pr... 29 2.1
At2g24130.1 68415.m02883 leucine-rich repeat transmembrane prote... 29 2.1
At1g19485.1 68414.m02427 AT hook motif-containing protein contai... 29 2.1
At5g39760.1 68418.m04816 zinc finger homeobox protein-related / ... 29 2.8
At5g18440.1 68418.m02172 hypothetical protein 29 2.8
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 29 2.8
At3g26350.1 68416.m03287 expressed protein ; expression support... 29 2.8
At1g61080.1 68414.m06877 proline-rich family protein 29 2.8
At1g21310.1 68414.m02662 proline-rich extensin-like family prote... 29 2.8
At5g35190.1 68418.m04170 proline-rich extensin-like family prote... 29 3.7
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 3.7
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 29 3.7
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 29 3.7
At3g06130.1 68416.m00704 heavy-metal-associated domain-containin... 29 3.7
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.7
At1g27750.1 68414.m03391 ubiquitin system component Cue domain-c... 29 3.7
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi... 28 4.9
At4g30230.1 68417.m04299 hypothetical protein 28 4.9
At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protei... 28 4.9
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 28 4.9
At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At2g43800.1 68415.m05445 formin homology 2 domain-containing pro... 28 4.9
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 28 4.9
At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR... 28 4.9
At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR... 28 4.9
At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associa... 28 6.5
At5g38560.1 68418.m04662 protein kinase family protein contains ... 28 6.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 6.5
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related 28 6.5
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 28 6.5
At3g50180.1 68416.m05486 hypothetical protein 28 6.5
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 28 6.5
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 28 6.5
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 28 6.5
At1g52580.1 68414.m05936 rhomboid family protein contains PFAM d... 28 6.5
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 28 6.5
At4g18570.1 68417.m02749 proline-rich family protein common fami... 27 8.6
At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /... 27 8.6
At3g24480.1 68416.m03070 leucine-rich repeat family protein / ex... 27 8.6
At3g18035.1 68416.m02292 histone H1/H5 family protein contains P... 27 8.6
At2g15880.1 68415.m01820 leucine-rich repeat family protein / ex... 27 8.6
At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family... 27 8.6
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 27 8.6
At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin fa... 27 8.6
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 27 8.6
>At5g06640.1 68418.m00750 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 689
Score = 34.3 bits (75), Expect = 0.075
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHH---KVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP H KVN P P ++SH SPS + N+K
Sbjct: 500 YKSPPPPYVYSSPPPPYHSPSPKVNYKSPPPPYVYSSHPPPYYSPSPKVNYK 551
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPPPMHH---KVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
+++ P PP + PPP + KVN P P ++S SPS + N+K
Sbjct: 524 NYKSPPPPYVYSSHPPPYYSPSPKVNYKSPPPPYVYSSPPPPYYSPSPKVNYK 576
>At5g19090.2 68418.m02270 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 465
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPLPMPNP 105
+ RP PP + P P H+ +PYP P P P
Sbjct: 410 YARP-PPAVNYMPPQPQPHQQHPYPYPYPYP 439
>At5g19090.1 68418.m02269 heavy-metal-associated domain-containing
protein contains Pfam heavy-metal-associated domain
PF00403; glycine-rich protein GRP22, rape, PIR:S31415;
isoform contains a non-consensus TG-acceptor splice site
at intron 3
Length = 587
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPLPMPNP 105
+ RP PP + P P H+ +PYP P P P
Sbjct: 532 YARP-PPAVNYMPPQPQPHQQHPYPYPYPYP 561
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 33.1 bits (72), Expect = 0.17
Identities = 19/77 (24%), Positives = 25/77 (32%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNHKQXXXXXXXXXXXXX 201
P PP +K PP +P P P+PH + KP P+ +
Sbjct: 83 PKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPSTPKPPTKPPPSTPKPP 142
Query: 202 XXXXXXKTFSPPHINKP 252
T PPH P
Sbjct: 143 TTKPPPSTPKPPHHKPP 159
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 PAPPEIKL--RRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP K P P HHK P P P P P + + P P
Sbjct: 139 PKPPTTKPPPSTPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPP 183
>At5g48920.1 68418.m06052 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 205
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPPPMHHKV--NPYPLPMPNPHNSHGMKKPSPSAQP 150
H P PP PPP H P P P P+PH P P P
Sbjct: 30 HISPPPPPFSPPHHPPPPHFSPPHQPPPSPYPHPHPPPPSPYPHPHQPP 78
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +1
Query: 19 RPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNH 156
+P P PPP +PYP P P H + P P+ P H
Sbjct: 54 QPPPSPYPHPHPPPP----SPYPHPHQPPPPPHVLPPPPPTPAPGH 95
>At1g31810.1 68414.m03904 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|P48608 Diaphanous protein {Drosophila
melanogaster}; contains Pfam profile PF02181: Formin
Homology 2(FH2) Domain
Length = 1201
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +1
Query: 22 PAPPEIKLRR-PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + R PPP+ P P P P P S PSPSA P
Sbjct: 577 PPPPPLPSRSIPPPLAQPPPPRPPPPPPPPPS-SRSIPSPSAPP 619
>At3g16510.1 68416.m02107 C2 domain-containing protein contains
similarity to shock protein SRC2 [Glycine max]
gi|2055230|dbj|BAA19769 ; contains Pfam profile
PF00168:C2 domain
Length = 360
Score = 31.5 bits (68), Expect = 0.53
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +1
Query: 55 PPMHHKVNPYPLPMPNPHNSHGMKKP 132
PP H+ PYP P P ++SH ++P
Sbjct: 213 PPQHYSSPPYPYPNPYQYHSHYPEQP 238
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = +1
Query: 7 EHFRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
EH P P K R PP P P P P+P +S PSP + P
Sbjct: 215 EHPSPPPPGHPKRREQPPPPGSKRPTPSP-PSPSDSKRPVHPSPPSPP 261
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNP 105
P+PP L PPP V+P P P P P
Sbjct: 75 PSPPSPSLTGPPPTTIPVSPPPEPSPPP 102
>At4g20440.2 68417.m02983 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPN-PHNSHGMKKPSPSAQPNHKQ 162
PP +R PPP H + P P P P G P P P+++Q
Sbjct: 211 PPGGMMRGPPPPPHGMQGPPPPRPGMPPAPGGFAPPRPGMPPHNQQ 256
>At4g20440.1 68417.m02982 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|Q05856 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Drosophila melanogaster}
Length = 257
Score = 31.1 bits (67), Expect = 0.70
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPN-PHNSHGMKKPSPSAQPNHKQ 162
PP +R PPP H + P P P P G P P P+++Q
Sbjct: 211 PPGGMMRGPPPPPHGMQGPPPPRPGMPPAPGGFAPPRPGMPPHNQQ 256
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 31.1 bits (67), Expect = 0.70
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + PPP++ P P P P P P P + P
Sbjct: 504 PPPPPVYSPPPPPVYSSPPPPPSPAPTPVYCTRPPPPPPHSPP 546
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP+ P P ++ P P P PH+ P P P
Sbjct: 545 PPPPQFSPPPPEPYYYSSPPPPHSSPPPHSPPPPHSPPPPIYP 587
Score = 29.1 bits (62), Expect = 2.8
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPP--PMHHKVNPYPLPMP 99
H+ P PPE+ PP P+H+ P P P
Sbjct: 668 HYSSPPPPEVHYHSPPPSPVHYSSPPPPPSAP 699
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP PPP++ P P P P P S P P P
Sbjct: 466 PPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPPPPPPPPPP 508
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + PPP P P+ P P + P PS P
Sbjct: 487 PPPPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAP 529
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + PPP P P P P S PSP+ P
Sbjct: 489 PPPPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSPAPTP 531
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSP--SAQPNH 156
PAP + RPPP P P P P + P P S+ P H
Sbjct: 527 PAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPYYYSSPPPPHSSPPPH 573
>At1g20790.1 68414.m02603 F-box family protein contains Pfam:PF00646
F-box domain
Length = 435
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/53 (33%), Positives = 22/53 (41%), Gaps = 4/53 (7%)
Frame = +1
Query: 4 HEHFRRPAPPEIKLRRPPPMH---HKVNPYPLPMPNPHN-SHGMKKPSPSAQP 150
H H P P + + P PMH H P P+ MP P + M P P P
Sbjct: 348 HVHVLMPMPMPMPMPMPMPMHMHMHMHMPMPMAMPMPMPIAMAMPMPMPMPMP 400
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 30.7 bits (66), Expect = 0.93
Identities = 16/46 (34%), Positives = 19/46 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
P PP+ K P P NP P P P P P+P+ P K
Sbjct: 81 PTPPKPK---PKPAPTPPNPKPTPAPTPPKPKPAPAPAPTPAPKPK 123
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
Frame = +1
Query: 25 APPEIKLRRPP--PMHHKVNPYPL---PMPNPHNSHGMK-KPSPSAQP 150
APP + + PP PM +P PL MP+P GM+ PSP P
Sbjct: 82 APPPMPMASPPMMPMTPSTSPSPLTVPDMPSPPMPSGMESSPSPGPMP 129
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 30.7 bits (66), Expect = 0.93
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP ++ +P P+ P P +NS SPS +P++K
Sbjct: 379 YKSPPPPYV-YSSPPPPYYSPSPKPVYKSPPPPYIYNSPPPPYYSPSPKPSYK 430
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP ++ +P P+ P P +NS SPS +P +K
Sbjct: 254 YKSPPPPYV-YSSPPPPYYSPSPKPIYKSPPPPYVYNSPPPPYYSPSPKPAYK 305
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP ++ +P P+ P P +NS SPS +P +K
Sbjct: 304 YKSPPPPYV-YSFPPPPYYSPSPKPVYKSPPPPYVYNSPPPPYYSPSPKPAYK 355
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +1
Query: 19 RPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
+ +PP PPP ++ P P+ P P +NS SPS +P +K
Sbjct: 582 KSSPPPYVYSSPPPPYYSPAPKPVYKSPPPPYVYNSPPPPYYSPSPKPTYK 632
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP I PPP ++ +P P+ P P ++S SPS +P +K
Sbjct: 204 YKSPPPPYI-YSSPPPPYYSPSPKPVYKSPPPPYVYSSPPPPYYSPSPKPAYK 255
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP ++ +P P P P ++S SPS +P +K
Sbjct: 329 YKSPPPPYV-YNSPPPPYYSPSPKPAYKSPPPPYVYSSPPPPYYSPSPKPTYK 380
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPL----PMPNPHNSHGMKKPSPSAQPNHK 159
++ P PP + PPP ++ P P P P ++S SPS +P +K
Sbjct: 631 YKSPPPPYV-YSSPPPPYYSPTPKPTYKSPPPPYVYSSPPPPYYSPSPKPTYK 682
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPN-PHNSHGMKKPSPSAQP 150
PP IK PPP H YP P+ PH +K P P P
Sbjct: 69 PPPIKKYPPPPYEHPPVKYPPPIKTYPHPP--VKYPPPEQYP 108
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVN-PYPLPMPNPHNSHGMKK-----PSPSAQPNH 156
RH H P+ P +HH + P P P+ + H H +K P+PS P H
Sbjct: 311 RHSHHTSPSTTPPPDSTPSNVHHHPSSPSPPPLSSHHQHHQERKKIADSPAPSPLPPH 368
>At1g75240.1 68414.m08741 zinc finger homeobox family protein /
ZF-HD homeobox family protein
Length = 309
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNPYPLPMP---NP--HNSHGMKKP 132
RH H+ RRPPP + +NP LP P P H+ +GM P
Sbjct: 139 RHHHYHHNQYGGGGGRRPPPPNMMLNPLMLPPPPNYQPIHHHKYGMSPP 187
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP+ + + PP K P P P P P S K P+P+ +P
Sbjct: 70 PTPPKPQPKPAPPPEPKPAPPPAPKPVPCPS-PPKPPAPTPKP 111
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +1
Query: 22 PAPPEIKLR--RPPPM-HHKVNPYPL--PMPNP-HNSHGMKKPSPSAQP 150
P PP + L RPPP + P PL PM P H H + P P P
Sbjct: 559 PPPPNLALNLPRPPPSAQYPGAPRPLGVPMMQPMHQQHQLTMPGPPGHP 607
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 29.9 bits (64), Expect = 1.6
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMP 99
P PP L P P +H ++P P P P
Sbjct: 716 PPPPHYSLPPPTPTYHYISPPPPPTP 741
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/51 (31%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPPPMHHK--VNPYPLPMPNPHNSHGMKKPSPSAQPNH 156
H+ P PP + PPP H + P P P H + P P P H
Sbjct: 731 HYISPPPPPTPIHSPPPQSHPPCIEYSPPPPPTVHYN-----PPPPPSPAH 776
>At3g19320.1 68416.m02450 leucine-rich repeat family protein
contains leucine-rich repeats, Pfam:PF00560;
Length = 493
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +1
Query: 22 PAP-PEIKLRRPPPMHHKVNPYPLPMPNP 105
P+P PE + PPP HH + P P P P P
Sbjct: 81 PSPSPEPEHYPPPPYHHYITPSP-PPPRP 108
Score = 27.9 bits (59), Expect = 6.5
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 10 HFRRPAP---PEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNH 156
++ PAP PE L PPP P P P P S + PSPS +P H
Sbjct: 46 NYNSPAPSPEPEDYLPLPPP------PQTPPPPPPPQS--LPPPSPSPEPEH 89
>At3g15000.1 68416.m01897 expressed protein similar to DAG protein
(required for chloroplast differentiation and palisade
development) GB:Q38732 [Antirrhinum majus]
Length = 395
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + PPP H N P P P+N G + P P P
Sbjct: 262 PPPPHMGGSAPPPPHMGQNYGP---PPPNNMGGPRHPPPYGAP 301
>At5g13760.1 68418.m01604 expressed protein similar to unknown
protein (gb AAF63775.1)
Length = 569
Score = 29.5 bits (63), Expect = 2.1
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 RRPAPPEIKLRRPPP-MHHKVNPYPLPMPNPHNSHGMKKPSP 138
R+P PP + + PP + + P P PN H + + P+P
Sbjct: 86 RQPPPPPPRPQTPPTFVPEETQPQTPPPPNQHQTRSIFTPTP 127
>At2g24130.1 68415.m02883 leucine-rich repeat transmembrane protein
kinase, putative
Length = 980
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/87 (19%), Positives = 41/87 (47%)
Frame = +2
Query: 17 EGQLLRKSNYVDRLLCITKSILIHYQCQILTIHME*RSQVHLHSQTISSRIIGLCR*IDL 196
E Q+L+++ + + + IT + +L + + HL+ SS+ + L + +++
Sbjct: 706 ECQILKRTRHRNLIRIITTCSKPGFNALVLPLMPNGSLERHLYPGEYSSKNLDLIQLVNI 765
Query: 197 CSPMSRR*RHFHHLILINLLRSDTPAS 277
CS ++ + HH + ++ D S
Sbjct: 766 CSDVAEGIAYLHHYSPVKVVHCDLKPS 792
>At1g19485.1 68414.m02427 AT hook motif-containing protein contains
Pfam profile: PF00730 HhH-GPD superfamily base excision
DNA repair protein; contains Pfam PF02178: AT hook
motif; contains Pfam PF00400: WD domain, G-beta repeat
(5 copies); contains Prosite PS00354: HMG-I and HMG-Y
DNA-binding domain (A+T-hook)
Length = 815
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Frame = +1
Query: 508 WEAYG-TPCSFRPTNDSNQTTRHKDTXNTTA-QFFQTSNPRVKLENELLSQNGYEASDF 678
W Y P SF N++ + + KD + T QF P+VK+ ++ S +G + DF
Sbjct: 54 WRHYNFEPKSFAFYNEAEKNHQPKDINSQTLPQFSSARAPKVKIHDDESSSSGEISKDF 112
>At5g39760.1 68418.m04816 zinc finger homeobox protein-related /
ZF-HD homeobox protein-related predicted proteins,
Arabidopsis thaliana
Length = 334
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSP 138
P PP + P HH+ +P P P P P S P P
Sbjct: 118 PPPPSTAVEYQP--HHRHHPPPPPPPPPPRSPNSASPPP 154
>At5g18440.1 68418.m02172 hypothetical protein
Length = 451
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSH-----GMKKPSPSAQ 147
F+ P RP PYP P+PNPH +H G +P P Q
Sbjct: 108 FQPSLEPHAFSSRPQLNSFNSLPYP-PVPNPHQNHQSGPPGFSEPRPQGQ 156
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/43 (41%), Positives = 19/43 (44%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP K PPP K +P P P P H K SPS P
Sbjct: 90 PPPPAPKKSPPPPTPKK-SPSP-PSLTPFVPHPTPKKSPSPPP 130
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 16 RRPAPPEIKLRRPPPMHHKVNPYPLPM--PNPHNSHGMKKPSPSAQPN 153
+ P PP K PP P+P P P+P + + P+P P+
Sbjct: 97 KSPPPPTPKKSPSPPSLTPFVPHPTPKKSPSPPPTPSLPPPAPKKSPS 144
>At3g26350.1 68416.m03287 expressed protein ; expression supported
by MPSS
Length = 356
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 7/53 (13%)
Frame = +1
Query: 16 RRPAPPEIKLRRPPPMHHKVNPYP-------LPMPNPHNSHGMKKPSPSAQPN 153
+RP PP+ R + P P P P+PH+ G + P PS + N
Sbjct: 118 QRPPPPQAPQRNGGGYGSTLPPIPKPSPWRTAPTPSPHHRRGPRLPPPSRETN 170
>At1g61080.1 68414.m06877 proline-rich family protein
Length = 907
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 52 PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
PPPM ++ P P PMP ++ G P P P
Sbjct: 567 PPPMQNRA-PSPPPMPMGNSGSGGPPPPPPPMP 598
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKV-NPYPLPMPNPHNSHGMKKPSPSAQP 150
P PP + PPP + N P P P P + G P P P
Sbjct: 553 PPPPGTQAAPPPPPPPPMQNRAPSPPPMPMGNSGSGGPPPPPPP 596
>At1g21310.1 68414.m02662 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 431
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 62 KHYEYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKK 118
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 342 KHYVYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKE 398
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/43 (30%), Positives = 17/43 (39%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSP 138
+F PP +K PP H+ P P P + K P P
Sbjct: 29 YFYSSPPPPVKHYTPPVKHYSPPPVYHSPPPPKKHYEYKSPPP 71
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 118 KHYVYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKK 174
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 174 KHYVYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKK 230
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 230 KHYVYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKK 286
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +1
Query: 1 RHEHFRRPAPPEIKLRRPPPMHHKVNP----YPLPMPNPHNSHGMKKPSPSAQPNHKQ 162
+H ++ P PP +K PPP++H P Y P P H P + P K+
Sbjct: 286 KHYVYKSPPPP-VKHYSPPPVYHSPPPPKKHYVYKSPPPPVKHYSPPPVYHSPPPPKK 342
>At5g35190.1 68418.m04170 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 328
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNP---YPLPMPNPHNSHGMKKPSPSAQP 150
++ P PP + PPP ++ +P Y P P P+ S ++ S P
Sbjct: 245 YKSPPPPYVYSSPPPPPYYSPSPEVSYKSPPPPPYYSPSLEVSYKSPPP 293
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 16 RRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
R P PP I PPP Y P P +G P P P
Sbjct: 168 RPPPPPTITRSPPPPRPQAAAYYKKTPPPPPYKYGRVYPPPPPPP 212
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/52 (30%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Frame = +1
Query: 16 RRPAPPE------IKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPN 153
R P PP K PPP + YP P P P + K+ P P+
Sbjct: 177 RSPPPPRPQAAAYYKKTPPPPPYKYGRVYPPPPPPPQAARSYKRSPPPPPPS 228
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 4 HEHFRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
H P P + PP H ++P+ LP P HG P PS +H+
Sbjct: 580 HPQQMLPMPNMPHHQLPPSSHMPLHPHHLPRPMQMPPHG-HMPPPSMPMSHQ 630
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Frame = +1
Query: 22 PAPPEIKLRRPPP-----MHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNH 156
P PP ++ R PPP M + P P P P P K S +P H
Sbjct: 33 PPPPLMRRRAPPPPPPPLMRRRAPPPPPPPPLPRPCSRPPKTKCSLKPLH 82
>At3g06130.1 68416.m00704 heavy-metal-associated domain-containing
protein contains Pfam heavy metal associated domain
PF00403
Length = 473
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 13 FRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPH 108
+ RP PP + P P H NP+P P P P+
Sbjct: 418 YARP-PPAVNYMPPNP-HQYPNPHPYPYPYPY 447
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSA 144
PP +L PPP + P P+ + H ++ ++ PSPS+
Sbjct: 474 PPAQRLPSPPPRRAGL-PSPMRIGGSHAANHLESPSPSS 511
>At1g27750.1 68414.m03391 ubiquitin system component Cue
domain-containing protein very low similarity to ASC-1
complex subunit P100 [Homo sapiens] GI:12061187;
contains Pfam profile PF02845: CUE domain
Length = 1973
Score = 28.7 bits (61), Expect = 3.7
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P P+ + PPP P LP P PH SH P P P
Sbjct: 862 PLQPQSQPPEPPPEMMPPPPQALPPPLPH-SHPPLVPPPPFSP 903
>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
to proline-rich protein [Arabidopsis thaliana]
gi|6782442|gb|AAF28388; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 448
Score = 28.3 bits (60), Expect = 4.9
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPNPHNSH 117
PP + + +PPP K P P+ P P H
Sbjct: 256 PPPVPVYKPPPKIEKPPPVPVYKPPPKIEH 285
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +1
Query: 16 RRPAPPEIKLRRPP-PMHHKVNPYPLPMPNPHNSHGMKKPSP 138
++P PP + + +PP + K P P+P+ P KKP P
Sbjct: 373 KKPCPPPVPIYKPPVVIPKKPCPPPVPVYKPPVVVIPKKPCP 414
>At4g30230.1 68417.m04299 hypothetical protein
Length = 260
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPNPHN--SHGMKKPSPS 141
PPEI+L+ + N P+ P+P N + G + PSPS
Sbjct: 193 PPEIELKDIKSRQIRRNIPPVMFPSPANRRARGSRSPSPS 232
>At4g25790.1 68417.m03711 allergen V5/Tpx-1-related family protein
similar to SP|Q40374 Pathogenesis-related protein PR-1
precursor {Medicago truncatula}; contains Pfam profile
PF00188: SCP-like extracellular protein
Length = 210
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/49 (32%), Positives = 20/49 (40%)
Frame = +1
Query: 4 HEHFRRPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
H + R P PPP K P P P P P + +P P+ QP
Sbjct: 25 HADYYRHRPQRPITPSPPPYVAKPQPLPTPSPKPI----LYQPPPTYQP 69
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKP--SPSAQPNH 156
PP ++ PPP+ P P+ P P H P SP P H
Sbjct: 728 PPPVQSPPPPPVFSPPPPAPIYSPPPPPVHSPPPPVHSPPPPPVH 772
>At3g09770.2 68416.m01158 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 341
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNP---HNSHGMKKPSPSAQP 150
P P +++ P + V PYP P PNP + + P P A P
Sbjct: 36 PPPLPTEIQANPIVFAAVTPYPNPNPNPVYQYPASYYHHPPPGAMP 81
>At3g09770.1 68416.m01157 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 388
Score = 28.3 bits (60), Expect = 4.9
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNP---HNSHGMKKPSPSAQP 150
P P +++ P + V PYP P PNP + + P P A P
Sbjct: 36 PPPLPTEIQANPIVFAAVTPYPNPNPNPVYQYPASYYHHPPPGAMP 81
>At2g43800.1 68415.m05445 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 894
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 52 PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
PPP V+ P P P+PH H KK + P
Sbjct: 42 PPPYQPPVSSQP-PSPSPHTHHHHKKHLTTTTP 73
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSP 138
P PP PPP K P P P P G P P
Sbjct: 386 PPPPPSAAAPPPPPPPKKGPAAPPPPPPPGKKGAGPPPP 424
>At1g02840.3 68414.m00246 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 19 RPAPPEIKLRRPPPMHHKVNPY-PLPMPNPHNSHGMKKPSPSAQPNH 156
R P K R P P + PLP S KPSP+ P H
Sbjct: 251 RSPGPRSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 297
>At1g02840.1 68414.m00245 pre-mRNA splicing factor SF2 (SF2) / SR1
protein identical to SP|O22315 Pre-mRNA splicing factor
SF2 (SR1 protein) {Arabidopsis thaliana}
Length = 303
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/47 (34%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +1
Query: 19 RPAPPEIKLRRPPPMHHKVNPY-PLPMPNPHNSHGMKKPSPSAQPNH 156
R P K R P P + PLP S KPSP+ P H
Sbjct: 251 RSPGPRSKSRSPSPRRSRSRSRSPLPSVQKEGSKSPSKPSPAKSPIH 297
>At5g44500.1 68418.m05452 small nuclear ribonucleoprotein associated
protein B, putative / snRNP-B, putative / Sm protein B,
putative similar to SP|P27048 Small nuclear
ribonucleoprotein associated protein B (snRNP-B) (Sm
protein B) (Sm-B) (SmB) {Mus musculus}
Length = 254
Score = 27.9 bits (59), Expect = 6.5
Identities = 18/48 (37%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Frame = +1
Query: 28 PPEIKLRRPPPMHHKVNPYPL--PMPNPHNSHGMKKPSPS---AQPNH 156
PP +R PPP H P P MP P + P P A PNH
Sbjct: 202 PPGGMMRGPPPPHGMQGPPPSRPGMPPPGGAPMFAPPHPGMPPAPPNH 249
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPS 141
P+PP PPP P P P P + KPSPS
Sbjct: 123 PSPPAPTTTNPPPKPSPSPPGETPSP-PGETPSPPKPSPS 161
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPL--PMPNPHNSHGMKKPSPSAQP 150
P PP + PPP H P P+ P P P H P S P
Sbjct: 533 PPPPPPPVHSPPPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPP 577
>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
Length = 1069
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +1
Query: 19 RPAP--PEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
RP P P R PPP +P P P +P + PSP ++P
Sbjct: 45 RPPPMMPGSGPRPPPPFGQ--SPQPFPQQSPSYGAPQRGPSPMSRP 88
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = +1
Query: 10 HFRRPAPPEIKLRRPPPMHH---KVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
H++ P PP + PPP + KV+ P P +NS SPS + +K
Sbjct: 542 HYKSPPPPYVYSSPPPPYYSPSPKVHYKSPPPPYVYNSPPPPYYSPSPKVYYK 594
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Frame = +1
Query: 22 PAPPEIKLRR---PPPMHHKVNPYPLPMPNP 105
P PP ++LRR PPP P P P P P
Sbjct: 12 PLPPRLELRRQRAPPPQPPPPPPPPPPPPPP 42
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 52 PPPMHHKVNPYP--LPMPNPHNSHGMKKPSPSAQP 150
PPP H V+P P P P P +S P PS P
Sbjct: 35 PPPWDHNVSPPPETAPSPTPTSSPSTTSP-PSPGP 68
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
PA P + PPP P +P P P PSPS+ P
Sbjct: 102 PATPP-PVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSP 143
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
PA P + PPP P +P P P PSPS+ P
Sbjct: 102 PATPP-PVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSP 143
>At1g52580.1 68414.m05936 rhomboid family protein contains PFAM
domain PF01694, Rhomboid family
Length = 309
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 16 RRPAPPEIKLRRPPPMHHKVNPYPLPMP 99
R P PP+I+ PPP P P+P+P
Sbjct: 4 RPPIPPDIENGPPPPARPHFRP-PIPVP 30
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/63 (23%), Positives = 30/63 (47%)
Frame = +3
Query: 261 QIHQHLLKNDPNPTQQTPLSTITANNKHGPNNMHLPVQTLSVGQSDIIVNQVVKSQITLP 440
++H + L + + T + +T+ NKH +M LP + + +N + +T P
Sbjct: 154 EVHVNQLSSTTSGTLNSS-TTVQGLNKHPEQHMQLPSSSFHMDTKSGSLNPYPGTNVTSP 212
Query: 441 GSN 449
GS+
Sbjct: 213 GSS 215
>At4g18570.1 68417.m02749 proline-rich family protein common family
members: At3g25690, At4g04980, At5g61090 [Arabidopsis
thaliana]
Length = 642
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNP 105
P PP ++ PPP K P P P P P
Sbjct: 316 PPPPLLQQPPPPPSVSKAPPPPPPPPPP 343
>At4g01890.1 68417.m00247 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein similar to
polygalacturonase [Lycopersicon esculentum] GI:7381227;
contains PF00295: Glycosyl hydrolases family 28
(polygalacturonases)
Length = 468
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 61 MHHKVNPYPLPMPNPHNSHGMKKPSPSAQPNHK 159
+HH+ + P P PNP++ K PS S +H+
Sbjct: 32 LHHQASQPPSPSPNPNDP--SKSPSRSQDLDHE 62
>At3g24480.1 68416.m03070 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 494
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 19 RPAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPS 141
+P+PP + L PPP P P P+ +P S + P PS
Sbjct: 402 KPSPPIVALPPPPP---PSPPLPPPVYSPPPSPPVFSPPPS 439
>At3g18035.1 68416.m02292 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family;similar
to HMG I/Y like protein (GI:15706274) [Glycine
max];similar to HMR1 protein (GI:4218141) [Antirrhinum
majus]; similar to high mobility group protein
(GI:1483173) [Canavalia gladiata]
Length = 480
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 52 PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQ 147
P P N +PL PNP+N+H + +P P Q
Sbjct: 16 PFPHFPTSNHHPLG-PNPYNNHVVFQPQPQTQ 46
>At2g15880.1 68415.m01820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 727
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Frame = +1
Query: 37 IKLRR---PPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
+K RR PPP+H P P+ P P + P P P
Sbjct: 487 VKFRRSPPPPPVHSPPPPSPIHSPPPPPVYSPPPPPPVYSP 527
>At1g79730.1 68414.m09300 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 589
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 22 PAPPEIKLR-RPPPMHHKVNPYPLPMPNPHNSHGMKKP 132
P PP + PPP H+ YP P P P +++ + P
Sbjct: 24 PPPPSLPPPVPPPPPSHQPYSYPPPPPPPPHAYYQQGP 61
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 18/43 (41%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPSPSAQP 150
P+PP PPP+H P P +P H P P A P
Sbjct: 543 PSPPSPIYSPPPPVHS---PPPPVYSSPPPPHVYSPPPPVASP 582
>At1g28290.1 68414.m03472 pollen Ole e 1 allergen and extensin
family protein similar to arabinogalactan protein
[Daucus carota] GI:11322245; contains Pfam profile
PF01190: Pollen proteins Ole e I family
Length = 359
Score = 27.5 bits (58), Expect = 8.6
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Frame = +1
Query: 22 PAPPEIKLRRP-PPMHHKVNPYPLPMPNPHNSHGMKKP-----SPSAQP 150
PAP P PP HH P+P P P+P +K P SP A+P
Sbjct: 40 PAPYHHGHHHPHPPHHHH--PHPHPHPHPPAKSPVKPPVKAPVSPPAKP 86
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/38 (31%), Positives = 16/38 (42%)
Frame = +1
Query: 22 PAPPEIKLRRPPPMHHKVNPYPLPMPNPHNSHGMKKPS 135
P PP P P HH + +P+ N + MK S
Sbjct: 237 PQPPSFPFGPPQPQHHHHHQFPITTNNFDHQDVMKPAS 274
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,174,299
Number of Sequences: 28952
Number of extensions: 306335
Number of successful extensions: 2009
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 1072
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1768
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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