Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0887
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...    24   5.1  
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        23   6.7  
CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein ...    23   8.9  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +3

Query: 237 PRSNPTREIDELMLKLDGTENK-SKLGANAI 326
           PR+   REI +L  +L+ TEN+  +L  NA+
Sbjct: 88  PRAPNPREIIDLEARLEKTENEILELSQNAV 118


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 341 SCC*GWCCQEECSAVQA 391
           SC   WCC+ +C   +A
Sbjct: 75  SCTFHWCCEVKCKLCRA 91


>CR954257-4|CAJ14155.1|  196|Anopheles gambiae predicted protein
           protein.
          Length = 196

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 532 FTEGGCPCGKIMNSCMASLFPACDP 458
           +T G CP GKI+        P C P
Sbjct: 106 YTRGYCPSGKIIYIEPKGKHPECVP 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 729,878
Number of Sequences: 2352
Number of extensions: 15359
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)