Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0886
(679 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory recept... 24 1.3
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 23 1.7
AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory recept... 23 3.0
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 22 5.3
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 22 5.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 22 5.3
AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory recept... 21 7.0
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.3
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 9.3
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 21 9.3
>AM292382-1|CAL23194.2| 670|Tribolium castaneum gustatory receptor
candidate 61 protein.
Length = 670
Score = 23.8 bits (49), Expect = 1.3
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 96 SKNMLDNIIVLVIILCFHNTCLQ*YLLYTICYVVYLIKLRPMN 224
S N + I+++ L NT +++ CY Y I +RP++
Sbjct: 529 SVNRIFGFIIIIGCLIQFNT-----IVFAFCYCYYSISIRPIS 566
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 23.4 bits (48), Expect = 1.7
Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Frame = +3
Query: 339 AFCI--ITIFHSDMCKFFV--TLNVSFSSASLKLSNI-SIISQERKYTNLSTFIFEYVFI 503
A C+ IT ++++ ++++ T+ V + L + +I + +Q R Y+N S F+F+ + I
Sbjct: 24 AICVPKITSTNNEVPRWYICYTIGVIITIGCLCIWSIFNKWNQFRSYSNFSVFLFDIITI 83
>AM292322-1|CAL23134.1| 373|Tribolium castaneum gustatory receptor
candidate 1 protein.
Length = 373
Score = 22.6 bits (46), Expect = 3.0
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +2
Query: 116 YYSTRN----YFMFSQHLPTIIFTLYNLL-CRLLNQI 211
Y+ RN Y+ HL I FT++N+ C L ++
Sbjct: 151 YFVQRNQEYKYYQILSHLSGIFFTVFNVAQCYLTTEL 187
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/39 (23%), Positives = 21/39 (53%)
Frame = -2
Query: 276 KTKSYLLGLDIHILWLPYSWVSI*LSRRHNKLYKVNIIV 160
KT +++ D+H LW ++ ++ R N K+ +++
Sbjct: 415 KTTTFMNYTDLHDLWGEFTLKALKRLERANNGVKIPLVI 453
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 21.8 bits (44), Expect = 5.3
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -3
Query: 635 IHHXNNLESYEP 600
I+H N E+YEP
Sbjct: 223 IYHQENFENYEP 234
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.8 bits (44), Expect = 5.3
Identities = 39/155 (25%), Positives = 63/155 (40%), Gaps = 14/155 (9%)
Frame = +3
Query: 9 LCYVLTI*K*LFNSIIITQRSNLIESNFHSK------NMLDNIIVLVIILCFHNTCLQ*Y 170
+ ++ T+ K FN +IT N E+ HSK L + ++ I+ F N L
Sbjct: 405 ITFMRTVWK-FFNIFLITPFYNFNENTIHSKLCKLYATFLIALKLVWIVALFKNENLSEM 463
Query: 171 L---LYT--ICYVVYLIKLRPMNRVTIIYVYQDPINNF*FFKSKYYKELVKFRVSLKKNT 335
+ L+T +V L L +N +++I IN + + K + K T
Sbjct: 464 VKQFLFTQKFTFVAGLATLSVLNLLSVIKSSFLDINTWKMLVKSFDAIDSKLQTGGKVET 523
Query: 336 ---KAFCIITIFHSDMCKFFVTLNVSFSSASLKLS 431
K FC I + FVT + S+ LK+S
Sbjct: 524 SICKNFCFGFITKQLIFMIFVTYQLYCWSSFLKIS 558
>AM292330-1|CAL23142.2| 408|Tribolium castaneum gustatory receptor
candidate 9 protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.0
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 133 LFYVFTTLAYNNIYFIQF 186
L Y+ T NN YFI F
Sbjct: 285 LSYIILTSFLNNFYFIIF 302
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = -1
Query: 622 IILNHTSPSLQFILCMPLNITPYNIRHLRTDVLTAAW 512
I++N P +C+ + + HL +D T W
Sbjct: 99 IVVNRKMPGPSVEVCLGDEVIIDVVNHLSSDSTTIHW 135
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +3
Query: 327 KNTKAFCIITIFHSDMCKFFVTLNV 401
KN K ++ F +C F +T+N+
Sbjct: 18 KNFKYLKVLVTFAHFICLFPITINI 42
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2
Query: 152 HLPTIIFTLYNLLC 193
+ P IIFT++ LLC
Sbjct: 86 YCPFIIFTVHFLLC 99
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,766
Number of Sequences: 336
Number of extensions: 3300
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -