Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0885
         (681 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT009949-1|AAQ22418.1|  590|Drosophila melanogaster RH55776p pro...    29   5.9  
AY051992-1|AAK93416.1| 1174|Drosophila melanogaster LD45949p pro...    29   5.9  
AE013599-840|AAF58959.3|  590|Drosophila melanogaster CG2049-PE,...    29   5.9  
AE013599-839|AAM68825.1| 1386|Drosophila melanogaster CG2049-PD,...    29   5.9  
AE013599-838|AAM68824.1| 1205|Drosophila melanogaster CG2049-PF,...    29   5.9  
AE013599-837|AAM68823.2| 1407|Drosophila melanogaster CG2049-PC,...    29   5.9  
AE013599-836|AAF58958.2| 1190|Drosophila melanogaster CG2049-PB,...    29   5.9  

>BT009949-1|AAQ22418.1|  590|Drosophila melanogaster RH55776p
           protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438 LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
           +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 321 MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 356


>AY051992-1|AAK93416.1| 1174|Drosophila melanogaster LD45949p protein.
          Length = 1174

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438  LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
            +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 905  MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 940


>AE013599-840|AAF58959.3|  590|Drosophila melanogaster CG2049-PE,
           isoform E protein.
          Length = 590

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438 LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
           +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 321 MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 356


>AE013599-839|AAM68825.1| 1386|Drosophila melanogaster CG2049-PD,
            isoform D protein.
          Length = 1386

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438  LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
            +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 1153 MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 1188


>AE013599-838|AAM68824.1| 1205|Drosophila melanogaster CG2049-PF,
            isoform F protein.
          Length = 1205

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438  LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
            +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 936  MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 971


>AE013599-837|AAM68823.2| 1407|Drosophila melanogaster CG2049-PC,
            isoform C protein.
          Length = 1407

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438  LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
            +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 1138 MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 1173


>AE013599-836|AAF58958.2| 1190|Drosophila melanogaster CG2049-PB,
            isoform B protein.
          Length = 1190

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +3

Query: 438  LRFPYSYNDYPALQTETH*CFSAE*AGLWYLPVRIH 545
            +R P+  N Y   QTE H CF  E A    L + IH
Sbjct: 921  MRHPFLVNLYSCFQTEQHVCFVMEYAAGGDLMMHIH 956


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,285,782
Number of Sequences: 53049
Number of extensions: 539795
Number of successful extensions: 765
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2971922400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)