BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= br--0884 (678 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 25 1.7 AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 24 5.1 M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles ... 23 8.9 EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 23 8.9 >AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium channel alpha subunitprotein. Length = 2139 Score = 25.4 bits (53), Expect = 1.7 Identities = 9/26 (34%), Positives = 17/26 (65%) Frame = -1 Query: 111 LFISCCLLNIFLVSFHFIIKXXXVFE 34 +F S CL+ IF + +H+ I+ +F+ Sbjct: 1665 IFSSECLMKIFALRYHYFIEPWNLFD 1690 >AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. Length = 1132 Score = 23.8 bits (49), Expect = 5.1 Identities = 9/19 (47%), Positives = 13/19 (68%) Frame = +3 Query: 306 KEMFAFTDEVCSLNIMIXF 362 +E+F F ++VC NI I F Sbjct: 412 EEVFMFVEKVCKNNIKIRF 430 >M93689-2|AAA29367.1| 975|Anopheles gambiae protein ( Anopheles gambiae T1 retroposon. ). Length = 975 Score = 23.0 bits (47), Expect = 8.9 Identities = 9/22 (40%), Positives = 10/22 (45%) Frame = +2 Query: 611 QHTXLCQKKPFLGXFELXEHFY 676 +HT P L F L HFY Sbjct: 932 RHTLYTFNDPILSCFRLFNHFY 953 >EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium channel alpha1 subunit protein. Length = 1893 Score = 23.0 bits (47), Expect = 8.9 Identities = 7/14 (50%), Positives = 12/14 (85%) Frame = -3 Query: 415 YYIYVYICNSYIVL 374 Y+I ++IC +YI+L Sbjct: 694 YFIILFICGNYILL 707 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 578,842 Number of Sequences: 2352 Number of extensions: 10870 Number of successful extensions: 14 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 14 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 68159265 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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