Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0884
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   1.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   5.1  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    23   8.9  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = -1

Query: 111  LFISCCLLNIFLVSFHFIIKXXXVFE 34
            +F S CL+ IF + +H+ I+   +F+
Sbjct: 1665 IFSSECLMKIFALRYHYFIEPWNLFD 1690


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 306 KEMFAFTDEVCSLNIMIXF 362
           +E+F F ++VC  NI I F
Sbjct: 412 EEVFMFVEKVCKNNIKIRF 430


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = +2

Query: 611 QHTXLCQKKPFLGXFELXEHFY 676
           +HT      P L  F L  HFY
Sbjct: 932 RHTLYTFNDPILSCFRLFNHFY 953


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -3

Query: 415 YYIYVYICNSYIVL 374
           Y+I ++IC +YI+L
Sbjct: 694 YFIILFICGNYILL 707


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,842
Number of Sequences: 2352
Number of extensions: 10870
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)