Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0869
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    25   0.57 
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   4.0  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    22   4.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.0  
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    21   7.0  

>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 354 CIESKVVKENLPKERKSNDSLEK 286
           C+ES ++ E +PK RK  + L K
Sbjct: 98  CVESLLLSEEMPKFRKMIEYLSK 120


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 281 HRWMIMNFDVFCWFSW 234
           H+W+++NFD  C   W
Sbjct: 302 HKWLLVNFD--CSTMW 315


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = -2

Query: 491 HLCDKFYH 468
           H+CDKFY+
Sbjct: 120 HICDKFYY 127


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +2

Query: 413 NIMMIVTRPLKLVLKCFFNDKIYHTSAT*YRLYYCSI*RFF 535
           N ++I  R  K+   CF    I  T    Y   YC   RFF
Sbjct: 33  NFVIISPRCDKISAICFLLSTILGTCWIIYVRIYCKEIRFF 73


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 305 DFLSFGRFSFTTLLSMQLLFPFY 373
           D L FG F      ++QL F FY
Sbjct: 135 DILGFGYFREYLAEAVQLYFQFY 157


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,258
Number of Sequences: 336
Number of extensions: 2915
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)