Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0869
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    23   6.7  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    23   6.7  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   6.7  

>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 281 HRWMIMNFDVFCWFSW 234
           H+WM++NFD  C   W
Sbjct: 308 HKWMLVNFD--CSAMW 321


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -2

Query: 281 HRWMIMNFDVFCWFSW 234
           H+WM++NFD  C   W
Sbjct: 339 HKWMLVNFD--CSAMW 352


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 348 ESKVVKENLPKERKSNDSLEK 286
           E  ++++NL + RK N+SL++
Sbjct: 37  EMLILRQNLEETRKKNESLQE 57


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,306
Number of Sequences: 2352
Number of extensions: 11550
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)