Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0867
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   1.9  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    22   3.3  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.7  

>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 312 SQKVLQMAWHRLEHVRSWVNELD 380
           S+K+++   H ++H R W NEL+
Sbjct: 86  SKKIMR---HLIDHKRDWWNELE 105


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 69  GCTDGKDSSSRRNRKGYYHLSTMCSSSTS 155
           GC  G   + R  R+G++H    C + ++
Sbjct: 67  GCLVGTPETLRCQREGFFHEREPCIAGSA 95


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 348 EHVRSWVNELDRLKASHLATPRTATGSVP 434
           E+  SWVN L  ++      P  +TG  P
Sbjct: 314 ENHASWVNHLSNIEDCLNYVPHISTGFSP 342


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -3

Query: 84  FHRCSHDFYCYLIIL 40
           F  C + FYC LIIL
Sbjct: 281 FLLCIYYFYCALIIL 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,938
Number of Sequences: 336
Number of extensions: 2749
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)