Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0867
         (578 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   2.3  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.1  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   5.4  
AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein prot...    23   5.4  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   9.5  
AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.            23   9.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 2.3
 Identities = 10/37 (27%), Positives = 21/37 (56%)
 Frame = +2

Query: 320 GFANGLASFRTCQIMGERIGSSESFSFGNSKNSNRKC 430
           GF  G ++ +  Q++ +    S + SFG + N +++C
Sbjct: 535 GFRRGRSTVQAIQLVVD--AGSHAMSFGRTNNRDKRC 569


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 12/42 (28%), Positives = 23/42 (54%)
 Frame = -2

Query: 256  IVHSTLIPLD*VFLKTVMCLIQLVFDQIFLYSIQEVLELHIV 131
            +++S  IPL+ +  K  +   +   ++I + SIQE +  H V
Sbjct: 884  VLNSRWIPLNKIHKKLALSTEESSINEILMNSIQEQINYHQV 925


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 355 TCSKRCQAICKTFCEAYPEPSCG 287
           TC   C   CK FC    E +CG
Sbjct: 518 TCGD-CHQECKDFCYGPNEDNCG 539


>AJ010903-1|CAA09389.1|  373|Anopheles gambiae ICHIT protein
           protein.
          Length = 373

 Score = 23.4 bits (48), Expect = 5.4
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -2

Query: 316 CEAYPEPSCGCP 281
           C++Y    CGCP
Sbjct: 335 CDSYSSSQCGCP 346


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 416 CSWSCQMRSFQTIQFVH 366
           CSWS +   +QTI   H
Sbjct: 94  CSWSREAEIYQTIMLRH 110


>AY341161-1|AAR13725.1|  159|Anopheles gambiae CED6 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 411 RTATGSVPNGNMTSSGTST 467
           +T TG+ P  ++ SSG  T
Sbjct: 89  KTGTGATPTSSIASSGDDT 107


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 578,041
Number of Sequences: 2352
Number of extensions: 11283
Number of successful extensions: 63
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)