Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0864
(514 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VWD1 Cluster: CG14235-PA, isoform A; n=11; Fungi/Meta... 48 9e-05
UniRef50_Q01519 Cluster: Cytochrome c oxidase polypeptide VIb; n... 44 0.002
UniRef50_Q9SXV0 Cluster: Cytochrome c oxidase subunit 6b-1; n=12... 44 0.003
UniRef50_Q9S7L9 Cluster: Subunit 6b of cytochrome c oxidase; n=1... 43 0.004
UniRef50_Q759N5 Cluster: ADR240Cp; n=1; Eremothecium gossypii|Re... 43 0.004
UniRef50_Q9BL34 Cluster: Putative uncharacterized protein; n=2; ... 40 0.044
UniRef50_P56391 Cluster: Cytochrome c oxidase subunit VIb isofor... 39 0.058
UniRef50_A7RJL7 Cluster: Predicted protein; n=1; Nematostella ve... 38 0.10
UniRef50_Q6C5M8 Cluster: Similar to sp|Q01519 Saccharomyces cere... 36 0.41
UniRef50_Q7SXM1 Cluster: Zgc:66195; n=10; Eumetazoa|Rep: Zgc:661... 36 0.72
UniRef50_Q7XY46 Cluster: Cytochrome c oxidase subunit 6b-1; n=2;... 36 0.72
UniRef50_Q00TI2 Cluster: Putative cytochrome c oxidase subunit 6... 35 0.95
UniRef50_A6R2A3 Cluster: Cytochrome c oxidase polypeptide VIb; n... 35 1.2
UniRef50_Q54P95 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q6YFQ2 Cluster: Cytochrome c oxidase subunit VIb isofor... 33 2.9
>UniRef50_Q9VWD1 Cluster: CG14235-PA, isoform A; n=11; Fungi/Metazoa
group|Rep: CG14235-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 96
Score = 48.4 bits (110), Expect = 9e-05
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C Y + +++CPN W+ WD+QRE G FPG I
Sbjct: 50 FHRCQKKRGEDFAPCNYFQKVYKSMCPNAWVEKWDDQRESGTFPGRI 96
>UniRef50_Q01519 Cluster: Cytochrome c oxidase polypeptide VIb;
n=15; Ascomycota|Rep: Cytochrome c oxidase polypeptide
VIb - Saccharomyces cerevisiae (Baker's yeast)
Length = 83
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C ++ K +CP WI WD+QREKGIF G I
Sbjct: 34 YHKCVNMKGEDFAPCKVFWKTYNALCPLDWIEKWDDQREKGIFAGDI 80
>UniRef50_Q9SXV0 Cluster: Cytochrome c oxidase subunit 6b-1; n=12;
Eukaryota|Rep: Cytochrome c oxidase subunit 6b-1 - Oryza
sativa subsp. japonica (Rice)
Length = 169
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = -1
Query: 412 AKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
AKY R ++CP W+ W+EQRE G FPGP+
Sbjct: 141 AKYYR----SLCPGEWVERWNEQRENGTFPGPL 169
>UniRef50_Q9S7L9 Cluster: Subunit 6b of cytochrome c oxidase; n=14;
Viridiplantae|Rep: Subunit 6b of cytochrome c oxidase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 191
Score = 43.2 bits (97), Expect = 0.004
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = -1
Query: 385 TICPNYWISHWDEQREKGIFPGPI 314
++CP+ W+ W+EQRE G FPGP+
Sbjct: 167 SLCPSEWVDRWNEQRENGTFPGPL 190
>UniRef50_Q759N5 Cluster: ADR240Cp; n=1; Eremothecium gossypii|Rep:
ADR240Cp - Ashbya gossypii (Yeast) (Eremothecium
gossypii)
Length = 79
Score = 43.2 bits (97), Expect = 0.004
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFPG 320
+H C + K ++CP W+ WDEQR KGIFPG
Sbjct: 32 YHKCVNAKGEDFGPCKVFFRTFSSLCPVEWVEKWDEQRSKGIFPG 76
>UniRef50_Q9BL34 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 121
Score = 39.5 bits (88), Expect = 0.044
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFP 323
FH C L + K+ ++ + CP +W WDE +G FP
Sbjct: 73 FHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFP 116
>UniRef50_P56391 Cluster: Cytochrome c oxidase subunit VIb isoform
1; n=10; Coelomata|Rep: Cytochrome c oxidase subunit VIb
isoform 1 - Mus musculus (Mouse)
Length = 86
Score = 39.1 bits (87), Expect = 0.058
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ R +++CP W+S WD++ +G FPG I
Sbjct: 37 FHRCEKAMTAKGGDVSVCEWYRRVYKSLCPVSWVSAWDDRIAEGTFPGKI 86
>UniRef50_A7RJL7 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 82
Score = 38.3 bits (85), Expect = 0.10
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C++ ++ + ++CP WI W EQ E G FPG I
Sbjct: 36 FHKCSNKLGEDNEHCQWFKKTYISLCPRAWIETWTEQVENGTFPGRI 82
>UniRef50_Q6C5M8 Cluster: Similar to sp|Q01519 Saccharomyces
cerevisiae YLR038c COX12 cytochrome-c oxidase; n=4;
Dikarya|Rep: Similar to sp|Q01519 Saccharomyces
cerevisiae YLR038c COX12 cytochrome-c oxidase - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 36.3 bits (80), Expect = 0.41
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 385 TICPNYWISHWDEQREKGIFPGPI 314
++CP WI WD QREKG F G +
Sbjct: 59 SLCPQDWIEKWDGQREKGNFAGDL 82
>UniRef50_Q7SXM1 Cluster: Zgc:66195; n=10; Eumetazoa|Rep: Zgc:66195
- Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 86
Score = 35.5 bits (78), Expect = 0.72
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K ++ + +++CP W+ WD Q E G FPG I
Sbjct: 37 FHRCNKALSSKGQDTSPCEWYQRVYKSLCPISWVGKWDSQIEDGSFPGKI 86
>UniRef50_Q7XY46 Cluster: Cytochrome c oxidase subunit 6b-1; n=2;
Eukaryota|Rep: Cytochrome c oxidase subunit 6b-1 -
Griffithsia japonica (Red alga)
Length = 85
Score = 35.5 bits (78), Expect = 0.72
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 385 TICPNYWISHWDEQREKGIFPGP 317
++CP W+ WD +E+G FPGP
Sbjct: 62 SLCPIEWVEKWDTLKEEGRFPGP 84
>UniRef50_Q00TI2 Cluster: Putative cytochrome c oxidase subunit
6b-1; n=1; Ostreococcus tauri|Rep: Putative cytochrome c
oxidase subunit 6b-1 - Ostreococcus tauri
Length = 99
Score = 35.1 bits (77), Expect = 0.95
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = -1
Query: 460 NLFHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFPG 320
N FH C + + ICP W+ W+EQRE+G + G
Sbjct: 51 NEFHKCQAENGEGAEECEPLGKFYRAICPQEWVEKWNEQREEGTWAG 97
>UniRef50_A6R2A3 Cluster: Cytochrome c oxidase polypeptide VIb; n=7;
Pezizomycotina|Rep: Cytochrome c oxidase polypeptide VIb
- Ajellomyces capsulatus NAm1
Length = 92
Score = 34.7 bits (76), Expect = 1.2
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -1
Query: 454 FHXCTSLXRRKLMIAKYSRDXXETICPNYWISHWDEQREKGIFP 323
+H C K ++CP W WD+QRE G FP
Sbjct: 44 YHKCIIAKGEDFRPCKQFYLAYRSLCPKGWTDRWDDQREAGNFP 87
>UniRef50_Q54P95 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 78
Score = 34.3 bits (75), Expect = 1.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 385 TICPNYWISHWDEQREKGIFP 323
++CP WIS WDEQ+ +FP
Sbjct: 54 SLCPAAWISEWDEQKAADLFP 74
>UniRef50_Q6YFQ2 Cluster: Cytochrome c oxidase subunit VIb isoform
2; n=15; Coelomata|Rep: Cytochrome c oxidase subunit VIb
isoform 2 - Homo sapiens (Human)
Length = 88
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 414,342,500
Number of Sequences: 1657284
Number of extensions: 6366728
Number of successful extensions: 9837
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 9727
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9837
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31364627325
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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