Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0864
(514 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subuni... 45 2e-04
X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for ... 45 2e-04
CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein. 45 2e-04
CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein. 45 2e-04
BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase su... 45 2e-04
BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase su... 45 2e-04
BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase su... 45 2e-04
AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein. 45 2e-04
BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein. 33 0.44
BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase su... 33 0.44
U18920-1|AAA69700.1| 109|Homo sapiens unknown protein. 30 4.1
X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase prot... 29 9.5
>X54473-1|CAA38352.1| 86|Homo sapiens cytochrome oxidase subunit
VIb protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>X13923-1|CAA32114.1| 86|Homo sapiens protein ( Human mRNA for
cytochrome c oxidase subunit VIb (EC 1.9.3.1). ).
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR542137-1|CAG46934.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>CR456789-1|CAG33070.1| 86|Homo sapiens COX6B protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BT006945-1|AAP35591.1| 86|Homo sapiens cytochrome c oxidase
subunit VIb protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC002478-1|AAH02478.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC001015-1|AAH01015.1| 86|Homo sapiens cytochrome c oxidase
subunit Vib polypeptide 1 (ubiquitous) protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>AC002115-3|AAB57628.1| 86|Homo sapiens COXG protein.
Length = 86
Score = 44.8 bits (101), Expect = 2e-04
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
FH C K + + ++ + +++CP W++ WDEQR +G FPG I
Sbjct: 37 FHRCQKAMTAKGGDISVCEWYQRVYQSLCPTSWVTDWDEQRAEGTFPGKI 86
>BC100902-1|AAI00903.1| 88|Homo sapiens COX6B2 protein protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100901-1|AAI00902.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100900-1|AAI00901.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC100899-1|AAI00900.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC064548-1|AAH64548.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>BC026123-1|AAH26123.3| 88|Homo sapiens cytochrome c oxidase
subunit VIb polypeptide 2 (testis) protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>AY152398-1|AAN46751.1| 88|Homo sapiens cytochrome c oxidase
subunit VIb testes-specific isoform precursor protein.
Length = 88
Score = 33.5 bits (73), Expect = 0.44
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = -1
Query: 454 FHXCTSLXRRK---LMIAKYSRDXXETICPNYWISHWDEQREKGIFPGPI 314
+H C R+ +Y ++CP W+ W+EQ + GIF G I
Sbjct: 39 YHRCLKTRTRRGKSTQPCEYYFRVYHSLCPISWVESWNEQIKNGIFAGKI 88
>U18920-1|AAA69700.1| 109|Homo sapiens unknown protein.
Length = 109
Score = 30.3 bits (65), Expect = 4.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -3
Query: 215 LGQLLANSTPSG*AFARPAYPGETXKASGPPVILQS 108
L L STPSG +P ET ++S PP+++ S
Sbjct: 56 LAWALPTSTPSGRGCRLMLFPDETLRSSPPPIMMSS 91
>X58139-1|CAA41147.1| 17|Homo sapiens cytochrome-c oxidase
protein.
Length = 17
Score = 29.1 bits (62), Expect = 9.5
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 364 ISHWDEQREKGIFPGPI 314
++ WDEQR +G FPG I
Sbjct: 1 VTDWDEQRAEGTFPGKI 17
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,754,650
Number of Sequences: 237096
Number of extensions: 1022461
Number of successful extensions: 1166
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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