Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= br--0859
         (613 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.29 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    25   0.38 
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    25   0.38 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   0.50 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   4.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.2  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.2  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 447 VFINSHHSHLLCSKDEVSHQKYLTCAQTFYS 355
           +F N H   LLC      H  +L C   FYS
Sbjct: 187 IFFNMHLLFLLCLDYFTLHLLFLPCIYYFYS 217


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 404 MKFLIKNI*PALRHSILYVIVNSKCYTPHSVFQIW 300
           + FL K     L+ +I+ V+V   C+TP+ V  IW
Sbjct: 263 LAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIW 297


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 404 MKFLIKNI*PALRHSILYVIVNSKCYTPHSVFQIW 300
           + FL K     L+ +I+ V+V   C+TP+ V  IW
Sbjct: 263 LAFLGKAKVRTLKMTIIIVLVFFVCWTPYYVMCIW 297


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 79  SSNNIQHISEREPDDGDIDPSQDP 150
           SS +   +SER+PD+ + + S+DP
Sbjct: 5   SSASNPAVSERDPDEDNSEDSKDP 28


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 10  YRSPSPIRKDIVKLEDYLPEG 72
           Y  P P+ KD  +  DY+P G
Sbjct: 624 YEMP-PVPKDFPQCGDYVPSG 643


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 160  TIFMERSKASIENGM 204
            T FME SKA+++N +
Sbjct: 1136 TTFMEGSKATVKNNV 1150


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +1

Query: 160  TIFMERSKASIENGM 204
            T FME SKA+++N +
Sbjct: 1136 TTFMEGSKATVKNNV 1150


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 369 ERRLDIFDEKLHPLSKEGVSDD 434
           +RRL + D  L   +KEG+ DD
Sbjct: 278 KRRLAMLDLLLTAKNKEGLIDD 299


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 369 ERRLDIFDEKLHPLSKEGVSDD 434
           +RRL + D  L   +KEG+ DD
Sbjct: 278 KRRLAMLDLLLTAKNKEGLIDD 299


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,652
Number of Sequences: 336
Number of extensions: 2762
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)