Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0858
(617 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226; Eukar... 83 5e-15
UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S riboso... 83 7e-15
UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiell... 75 1e-12
UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 - Ra... 75 2e-12
UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4; Bilateria|... 73 7e-12
UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2; Dictyos... 71 2e-11
UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal ... 71 2e-11
UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma j... 71 2e-11
UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein; ... 71 3e-11
UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55; Eukar... 70 4e-11
UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 70 5e-11
UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=... 69 7e-11
UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A... 68 2e-10
UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp... 68 2e-10
UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S riboso... 67 4e-10
UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containin... 66 8e-10
UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, wh... 63 6e-09
UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=... 62 1e-08
UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A - ... 62 1e-08
UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3; Caenorhabdi... 59 1e-07
UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7; Plasmod... 58 1e-07
UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria g... 56 5e-07
UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3; ... 56 9e-07
UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia int... 55 2e-06
UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal ... 54 3e-06
UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleu... 48 1e-04
UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S riboso... 44 0.004
UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n... 39 0.11
UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillar... 37 0.33
UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044... 37 0.33
UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n... 35 1.4
UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n... 34 2.4
UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;... 33 4.1
UniRef50_A3VUC9 Cluster: Biotin protein ligase; n=1; Parvularcul... 33 7.2
UniRef50_Q47QY5 Cluster: N utilization substance protein B homol... 33 7.2
UniRef50_Q6IVN1 Cluster: Predicted type I site-specific deoxyrib... 32 9.5
UniRef50_Q8TW47 Cluster: ATPase subunit of an ABC-type transport... 32 9.5
>UniRef50_P62424 Cluster: 60S ribosomal protein L7a; n=226;
Eukaryota|Rep: 60S ribosomal protein L7a - Homo sapiens
(Human)
Length = 266
Score = 83.0 bits (196), Expect = 5e-15
Identities = 44/92 (47%), Positives = 50/92 (54%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 70 LYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVP 129
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
RP +R+G NTVT LVE K+ VVIAHDV
Sbjct: 130 TKRPPVLRAGVNTVTTLVENKKAQLVVIAHDV 161
Score = 79.0 bits (186), Expect = 8e-14
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPLFEKRPKNF IGQ IQP RDL+RFV+WP+YIR+QRQ+A+
Sbjct: 29 NPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAI 69
>UniRef50_UPI0000E1EF65 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) isoform 3; n=3;
Euarchontoglires|Rep: PREDICTED: similar to 60S
ribosomal protein L7a (Surfeit locus protein 3) isoform
3 - Pan troglodytes
Length = 243
Score = 82.6 bits (195), Expect = 7e-15
Identities = 43/92 (46%), Positives = 50/92 (54%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPP INQFTQ LD+ TA L K+ KYRPET
Sbjct: 67 LYKRLKVPPAINQFTQALDRQTATQLLKLAHKYRPETKQEKKQRPLAQAEKRAAGKGDVP 126
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
RP +R+G NT+T LVE K+ VVIAHDV
Sbjct: 127 IKRPPVLRAGVNTITTLVENKKAQLVVIAHDV 158
Score = 73.7 bits (173), Expect = 3e-12
Identities = 31/41 (75%), Positives = 36/41 (87%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPLFEKRPKNF IGQ IQP RDL+ FV+WP YIR+QRQ+A+
Sbjct: 26 NPLFEKRPKNFGIGQDIQPKRDLTCFVKWPCYIRLQRQRAI 66
>UniRef50_Q3SAE2 Cluster: Ribosomal protein L7A; n=2; Bigelowiella
natans|Rep: Ribosomal protein L7A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 248
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/92 (40%), Positives = 49/92 (53%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L++RL+VPP +NQFT T+DK A LFK+L KYRPE
Sbjct: 68 LKQRLRVPPAVNQFTNTIDKNQAMTLFKLLAKYRPENRKEKQERLKAIAEEKVKNAKSGN 127
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N +T LVE ++ VVIAHDV
Sbjct: 128 KDKPKVLKYGLNHITSLVESRKAKLVVIAHDV 159
Score = 65.3 bits (152), Expect = 1e-09
Identities = 26/39 (66%), Positives = 35/39 (89%)
Frame = +1
Query: 139 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
LF+K PK+F IG+ +QP ++LSRFV+WP+YIRIQRQKA+
Sbjct: 29 LFKKTPKDFRIGRSVQPKQNLSRFVKWPRYIRIQRQKAI 67
>UniRef50_Q7TQ86 Cluster: Ac1158; n=8; Eumetazoa|Rep: Ac1158 -
Rattus norvegicus (Rat)
Length = 540
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/60 (60%), Positives = 42/60 (70%)
Frame = +1
Query: 142 FEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCPLRSTNLPRHWTRLQ 321
FEKRPKNF I Q IQP RDL+RFV+W YIR+QRQ+A+ K L ST+ PR WT Q
Sbjct: 352 FEKRPKNFGIEQDIQPKRDLTRFVKWSCYIRLQRQRAILYKGSKYLLSSTSSPRPWTGRQ 411
>UniRef50_Q966C6-2 Cluster: Isoform c of Q966C6 ; n=4;
Bilateria|Rep: Isoform c of Q966C6 - Caenorhabditis
elegans
Length = 245
Score = 72.5 bits (170), Expect = 7e-12
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPLFEKR +NF IGQ IQP +D++RFV+WPKYIR+QRQ A+ K P
Sbjct: 30 NPLFEKRARNFNIGQDIQPKKDVTRFVKWPKYIRLQRQSAILQKRLKVP 78
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/92 (44%), Positives = 52/92 (56%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQ+RLKVPP INQF LD +A+ FK+L+KYRPE+
Sbjct: 71 LQKRLKVPPTINQFRTALDSQSARQAFKLLDKYRPES--------------------TEV 110
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
RPNT+R G NT+T+LVE + V+IAHDV
Sbjct: 111 TKRPNTVRHGVNTITRLVETRRAQLVLIAHDV 142
>UniRef50_Q54ZD1 Cluster: 60S ribosomal protein L7a; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L7a
- Dictyostelium discoideum AX4
Length = 285
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/96 (42%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPP INQFT+ DK TA LFK+L+KYRPE
Sbjct: 85 LLKRLKVPPTINQFTRVFDKNTAVHLFKLLDKYRPEEASVKKARLLKIAEARAATPKGQA 144
Query: 435 XXRPNT----IRSGTNTVTKLVEKKEXAAVVIAHDV 530
+ +R G ++VTKL+EKK+ VVIAHDV
Sbjct: 145 APKAEKPVQHLRFGIDSVTKLIEKKKAKLVVIAHDV 180
Score = 56.4 bits (130), Expect = 5e-07
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
N L+ K KNF G G+QP RDL+ F WP+YI++QRQ+ V
Sbjct: 44 NALYTKNVKNFGTGFGVQPKRDLTHFTHWPRYIKLQRQRRV 84
>UniRef50_UPI0001552F1A Cluster: PREDICTED: similar to Ribosomal
protein L7a; n=4; Eutheria|Rep: PREDICTED: similar to
Ribosomal protein L7a - Mus musculus
Length = 246
Score = 70.9 bits (166), Expect = 2e-11
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPLFEKRPK+F GQ IQP RDL FV+WP+YIR+QRQ+A+
Sbjct: 29 NPLFEKRPKHFGTGQDIQPKRDLMCFVKWPRYIRLQRQRAI 69
Score = 63.3 bits (147), Expect = 4e-09
Identities = 39/92 (42%), Positives = 49/92 (53%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L + LKVPP IN FTQ LD+ TA L K++ KYRPET
Sbjct: 70 LYKWLKVPPAINPFTQALDRQTATQLLKLVHKYRPET--------------------KQA 109
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
RP +++G NTVT L+E K+ VVIAHD+
Sbjct: 110 TKRPPVLQAGVNTVTTLMENKKAQLVVIAHDI 141
>UniRef50_Q5DG58 Cluster: SJCHGC02816 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02816 protein - Schistosoma
japonicum (Blood fluke)
Length = 252
Score = 70.9 bits (166), Expect = 2e-11
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPL ++RPKNF IGQ IQP R+L RFV+WPKYI +QR+KA+ K P
Sbjct: 54 NPLIQRRPKNFGIGQNIQPKRNLYRFVKWPKYIELQRKKAILKKRLKIP 102
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/92 (35%), Positives = 50/92 (54%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L++RLK+PPPI+QF+QTLD+ +A +F ++ KY+P +
Sbjct: 95 LKKRLKIPPPIHQFSQTLDRNSANQIFNLVTKYQPLSKQAKKMLLVHRAQLRAEGKPDQP 154
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
R T+R+G VT + +K+ VVIAHDV
Sbjct: 155 TPRKPTVRAGIREVTTAITQKKARLVVIAHDV 186
>UniRef50_A7APX8 Cluster: Ribosomal protein L7Ae family protein;
n=1; Babesia bovis|Rep: Ribosomal protein L7Ae family
protein - Babesia bovis
Length = 269
Score = 70.5 bits (165), Expect = 3e-11
Identities = 43/111 (38%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLK+PP INQF T+DK+ A L K+L KY+PET
Sbjct: 71 LLQRLKIPPAINQFNYTIDKSQAHQLLKLLSKYKPET-RKEKSARLLADANAIAQGQEVV 129
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDVXSY-LEXWFFFSCPGRLLP 584
+P ++SG N VT LVE K+ VVIAHDV L W C + +P
Sbjct: 130 SKKPYMLKSGLNHVTNLVEYKKAKLVVIAHDVDPLELVMWLPTLCRKKEVP 180
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +1
Query: 139 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
LF PKN+ IG I+P +LSR+V+WPKY+RIQRQ+ V
Sbjct: 32 LFVHPPKNYGIGGDIRPRVNLSRYVKWPKYVRIQRQRRV 70
>UniRef50_P29453 Cluster: 60S ribosomal protein L8-B; n=55;
Eukaryota|Rep: 60S ribosomal protein L8-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 256
Score = 70.1 bits (164), Expect = 4e-11
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPL PKNF IGQ +QP R+LSR+V+WP+Y+R+QRQK + S+ K P
Sbjct: 24 NPLTHSTPKNFGIGQAVQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVP 72
Score = 59.7 bits (138), Expect = 5e-08
Identities = 35/93 (37%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET-XXXXXXXXXXXXXXXXXXXXXX 431
L RLKVPP I QF TLD+ TA FK+ KYRPET
Sbjct: 65 LSIRLKVPPTIAQFQYTLDRNTAAETFKLFNKYRPETAAEKKERLTKEAAAIAEGKSKQD 124
Query: 432 XXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N V L+E K+ V+IA+DV
Sbjct: 125 ASPKPYAVKYGLNHVVSLIENKKAKLVLIANDV 157
>UniRef50_Q6CQ17 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome E of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome E of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 327
Score = 69.7 bits (163), Expect = 5e-11
Identities = 28/49 (57%), Positives = 38/49 (77%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPL + P+NF IGQ IQP R+LSR+V+WP+Y+R+QRQK + S+ K P
Sbjct: 95 NPLTKSSPRNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSIRLKVP 143
Score = 59.7 bits (138), Expect = 5e-08
Identities = 35/93 (37%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET-XXXXXXXXXXXXXXXXXXXXXX 431
L RLKVPP I QF TLD+ TA FK+L+KY PET
Sbjct: 136 LSIRLKVPPSIAQFQNTLDRNTAAETFKLLKKYSPETAAEKKERLTKEAAAIAEGKTKQE 195
Query: 432 XXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N V L+E K+ V+IA+DV
Sbjct: 196 ASPKPYVVKYGLNHVVSLIENKKAKLVLIANDV 228
>UniRef50_A2E3E3 Cluster: 60S ribosomal protein L7a, putative; n=4;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L7a,
putative - Trichomonas vaginalis G3
Length = 244
Score = 69.3 bits (162), Expect = 7e-11
Identities = 41/111 (36%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPPP+N F+ TLDK A LFK LE YRPET
Sbjct: 56 LMKRLKVPPPVNHFSHTLDKNIAVQLFKFLEHYRPETKAEKNQRHKEEADKTKKDLKVAA 115
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDVXSY-LEXWFFFSCPGRLLP 584
+ G VT VE K+ V+IAHDV L W C +P
Sbjct: 116 TCSKKALVQGIKNVTAAVESKKAQLVIIAHDVDPIELVIWLPALCRNLEIP 166
>UniRef50_Q4VH13 Cluster: Rpl7A; n=2; Euglena gracilis|Rep: Rpl7A -
Euglena gracilis
Length = 295
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +1
Query: 139 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
LFE RPKNF++GQ +QP RDLSRFVRWP YI+ QRQK +
Sbjct: 63 LFESRPKNFSVGQDLQPKRDLSRFVRWPAYIKRQRQKRI 101
Score = 57.6 bits (133), Expect = 2e-07
Identities = 33/92 (35%), Positives = 43/92 (46%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RL+VPP INQF T+D+ K LFK KY+PE+
Sbjct: 102 LLKRLRVPPAINQFNHTVDRHLKKELFKFALKYKPESSFERRSRLKKEAEAKLKDPKAPA 161
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+ SG V +LVE+K V+IAHDV
Sbjct: 162 SVPGPRVYSGAQRVFRLVEQKRAKLVLIAHDV 193
>UniRef50_Q75CI9 Cluster: ACL070Cp; n=31; Eukaryota|Rep: ACL070Cp -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 305
Score = 67.7 bits (158), Expect = 2e-10
Identities = 28/49 (57%), Positives = 37/49 (75%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPL P+NF IGQ IQP R+LSR+V+WP+Y+R+QRQK + S+ K P
Sbjct: 73 NPLTVSSPRNFGIGQAIQPKRNLSRYVKWPEYVRLQRQKKILSMRLKVP 121
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/93 (38%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET-XXXXXXXXXXXXXXXXXXXXXX 431
L RLKVPP I QF TLD+ TA FK+ KYRPET
Sbjct: 114 LSMRLKVPPTIAQFQHTLDRNTAAETFKLFNKYRPETAAEKKDRLATEAAAIAEGKTRME 173
Query: 432 XXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N V LVE K+ V+IA+DV
Sbjct: 174 ASPKPYAVKFGLNHVVSLVENKKAKLVLIANDV 206
>UniRef50_UPI00005A55A3 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a; n=2; Eutheria|Rep: PREDICTED: similar to
60S ribosomal protein L7a - Canis familiaris
Length = 231
Score = 66.9 bits (156), Expect = 4e-10
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPL EKRPK F IGQ IQP RDL+RFV+WP YI++Q Q+A+
Sbjct: 67 NPLCEKRPKYFGIGQDIQPKRDLNRFVKWPHYIQLQLQRAI 107
Score = 31.1 bits (67), Expect(2) = 0.054
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAK 326
L + L+VPP INQFTQ + T K
Sbjct: 108 LYKHLEVPPTINQFTQAFNSPTRK 131
Score = 27.9 bits (59), Expect(2) = 0.054
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 441 RPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
R + +++G NTVT LVE K+ +I H V
Sbjct: 147 RLSVLQAGVNTVTILVETKKAQLGMITHSV 176
>UniRef50_UPI00006D0064 Cluster: Ribosomal protein L7Ae containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein L7Ae containing protein - Tetrahymena
thermophila SB210
Length = 286
Score = 65.7 bits (153), Expect = 8e-10
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPLF+ +P++F +G IQP RDL+RFVRWP+YI +QRQK V
Sbjct: 118 NPLFQAKPRSFRVGGDIQPKRDLTRFVRWPRYITLQRQKRV 158
Score = 65.3 bits (152), Expect = 1e-09
Identities = 36/92 (39%), Positives = 47/92 (51%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPP I+QFT+TLDK + LFK+L Y PE
Sbjct: 159 LLQRLKVPPQIHQFTKTLDKNQSSNLFKLLASYAPE-KPAEKKQRLVAQAEAKKDGKQVE 217
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N +T L+E K+ VVIAHDV
Sbjct: 218 TKKPIVLKYGLNHITTLIENKQAKLVVIAHDV 249
>UniRef50_A0CSP0 Cluster: Chromosome undetermined scaffold_26, whole
genome shotgun sequence; n=13; Alveolata|Rep: Chromosome
undetermined scaffold_26, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 340
Score = 62.9 bits (146), Expect = 6e-09
Identities = 26/41 (63%), Positives = 31/41 (75%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPLF K KNF IG +QP RDLSR+VRWP+YI + RQK +
Sbjct: 104 NPLFVKDAKNFRIGNDVQPKRDLSRYVRWPRYILLHRQKKI 144
Score = 52.8 bits (121), Expect = 6e-06
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +R+KVP I+QF++TLDK + + +L+KY PET
Sbjct: 145 LLQRIKVPAAIHQFSRTLDKNQSSKVLGLLKKYSPET-KTEKKQRLTKLAEQKAQAQKTD 203
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+ ++ G N VT LVE K+ VVIA+DV
Sbjct: 204 SKKVQVLKFGLNHVTTLVETKKAKLVVIAYDV 235
>UniRef50_Q4QIP1 Cluster: 60S ribosomal protein L7a, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L7a,
putative - Leishmania major
Length = 264
Score = 62.1 bits (144), Expect = 1e-08
Identities = 37/112 (33%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQRRLKVPP +NQFT+ LD+ + K+++KY PET
Sbjct: 66 LQRRLKVPPALNQFTKVLDRASRNEALKLIKKYAPETRKARRERLQKVAEEKKKDPKKTV 125
Query: 435 XXR-PNTIRSGTNTVTKLVEKKEXAAVVIAHDVXSY-LEXWFFFSCPGRLLP 584
+ P + +G VT+ +EKK+ VVIA++V L W C +P
Sbjct: 126 STKAPLAVVTGLQEVTRAIEKKQARMVVIANNVDPVELVLWMPNLCRANKIP 177
Score = 54.4 bits (125), Expect = 2e-06
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1
Query: 142 FEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
F RPKNF IGQ + RDLSRF+RWP ++ +QR+K V K P
Sbjct: 28 FAARPKNFGIGQDVPYARDLSRFMRWPTFVTMQRKKRVLQRRLKVP 73
>UniRef50_Q3T2L9 Cluster: Rpl7A; n=2; Jakoba libera|Rep: Rpl7A -
Jakoba libera
Length = 250
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/92 (41%), Positives = 45/92 (48%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L RRLKVPP I QF TLDK A L +L KY PET
Sbjct: 93 LLRRLKVPPSIRQFRFTLDKNVATQLITLLSKYSPET----KAEKSARLLAAAQEGEGSS 148
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P ++ G N +T LVE+K+ VVIAHDV
Sbjct: 149 KKKPFVLKFGLNHITTLVEQKKAKLVVIAHDV 180
Score = 60.1 bits (139), Expect = 4e-08
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +1
Query: 151 RPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
RPKNF +G +QP RD++RFV+WPKYIR+QRQ+++
Sbjct: 58 RPKNFGLGGTVQPKRDVTRFVKWPKYIRLQRQRSI 92
>UniRef50_Q9NBK2 Cluster: Ribosomal protein L7a; n=3;
Caenorhabditis|Rep: Ribosomal protein L7a -
Caenorhabditis briggsae
Length = 73
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/41 (60%), Positives = 31/41 (75%)
Frame = +1
Query: 157 KNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
+NF IGQ IQP RD++RFV+WPKYIR+QRQ A+ K P
Sbjct: 1 RNFNIGQDIQPKRDVTRFVKWPKYIRLQRQSAILQKRLKIP 41
Score = 53.2 bits (122), Expect = 5e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPET 365
LQ+RLK+PP INQF LD +A+ FK+L+KYRPE+
Sbjct: 34 LQKRLKIPPTINQFRTALDSQSARQAFKLLDKYRPES 70
>UniRef50_Q7RAN9 Cluster: 60S ribosomal protein L7a; n=7;
Plasmodium|Rep: 60S ribosomal protein L7a - Plasmodium
yoelii yoelii
Length = 318
Score = 58.4 bits (135), Expect = 1e-07
Identities = 33/92 (35%), Positives = 46/92 (50%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +RLKVPP INQF TL K + L L++Y+PE+
Sbjct: 119 LLQRLKVPPAINQFNYTLSKNQTQDLMNFLKEYKPES-KSEKKERLLKKAKDDLNNAQSK 177
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P I+ G +TKL+E+K + VVIA+DV
Sbjct: 178 DKKPMMIKYGIKHITKLIERKNCSLVVIANDV 209
Score = 54.4 bits (125), Expect = 2e-06
Identities = 22/42 (52%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
Frame = +1
Query: 133 NPL-FEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
NPL FE++ K+ IG GI+P +DLS++V+WPK++R+QR+K +
Sbjct: 77 NPLIFERKRKSNIIGVGIRPKKDLSKYVKWPKHLRLQRKKKI 118
>UniRef50_Q3SAE1 Cluster: Ribosomal protein L7A; n=2; Naegleria
gruberi|Rep: Ribosomal protein L7A - Naegleria gruberi
Length = 258
Score = 56.4 bits (130), Expect = 5e-07
Identities = 31/92 (33%), Positives = 43/92 (46%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
L +R+K+PP INQF DK A + + L KY+PE
Sbjct: 69 LLKRVKIPPAINQFRIVADKPLAHSVVQFLAKYKPEDEQQKKERLRQAAKDKVEGKAATP 128
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+++ G N V K VE+K+ + VVIAHDV
Sbjct: 129 KKSESSLIHGINEVVKAVERKQASLVVIAHDV 160
Score = 46.4 bits (105), Expect = 5e-04
Identities = 18/39 (46%), Positives = 27/39 (69%)
Frame = +1
Query: 139 LFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAV 255
L RPK+ IG+ + +L+RFV+WP Y+R+QRQK +
Sbjct: 30 LLAPRPKDIGIGRDLGAKMNLTRFVKWPVYVRLQRQKRI 68
>UniRef50_UPI0000499ADF Cluster: 60S ribosomal protein L7a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L7a - Entamoeba histolytica HM-1:IMSS
Length = 286
Score = 55.6 bits (128), Expect = 9e-07
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQ-TLDKTTAKGLFKILEKYRPE-------TXXXXXXXXXXXXXXX 410
L +RLK PP +N F TLDKT A LFKIL+ +PE
Sbjct: 55 LMKRLKTPPAVNIFANHTLDKTNATQLFKILDHIKPEERAAKLQRIRAAAKELAEKTQKG 114
Query: 411 XXXXXXXXXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
+P T+ G N V +L+E+K+ VVIAHDV
Sbjct: 115 EKATASKKTEKPATLSYGINNVVRLIERKQAKLVVIAHDV 154
Score = 39.1 bits (87), Expect = 0.083
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +1
Query: 133 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
NPL K F G P RDL+R+V++P Y+RIQ++K + K P
Sbjct: 15 NPLIVANKKVFGKGNVAHP-RDLTRYVKYPLYVRIQKEKRLLMKRLKTP 62
>UniRef50_A7U817 Cluster: Ribosomal protein L7A; n=9; Giardia
intestinalis|Rep: Ribosomal protein L7A - Giardia
lamblia (Giardia intestinalis)
Length = 163
Score = 54.8 bits (126), Expect = 2e-06
Identities = 30/92 (32%), Positives = 39/92 (42%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXX 434
LQRRLKVPP +NQF + + +F + KY PE+
Sbjct: 47 LQRRLKVPPTVNQFMNPISRNLTNEIFNLARKYSPESKEEHKARLLQIADAKANGKPLPE 106
Query: 435 XXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
I SG +T LVE K V+IA+DV
Sbjct: 107 KSNKLVIASGIRRITSLVENKRAKLVLIANDV 138
Score = 37.5 bits (83), Expect = 0.25
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 196 DLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
DL+ FVRWP+ +R+QRQKAV K P
Sbjct: 27 DLTPFVRWPRQVRVQRQKAVLQRRLKVP 54
>UniRef50_UPI0001553583 Cluster: PREDICTED: similar to ribosomal
protein L7a; n=2; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L7a - Mus musculus
Length = 292
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +1
Query: 148 KRPKNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKA 252
KRPKNF+ GQ IQP DL+RFV+ P YIR+QRQ+A
Sbjct: 125 KRPKNFSTGQDIQPKCDLTRFVKRPCYIRLQRQRA 159
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +3
Query: 255 LQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPE 362
L ++LKVPP IN F Q LD+ TA L ++ KYRPE
Sbjct: 161 LYKQLKVPPAINPFPQALDRQTATKLLQLAHKYRPE 196
>UniRef50_Q3SAD9 Cluster: Ribosomal protein L7A; n=2; Spironucleus
barkhanus|Rep: Ribosomal protein L7A - Spironucleus
barkhanus
Length = 228
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +1
Query: 157 KNFAIGQGIQPTRDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
K +G G+ +DL+R+VRWP YIRIQRQKA+ K P
Sbjct: 17 KTSQMGVGVHTQKDLTRYVRWPAYIRIQRQKALLQTRLKVP 57
>UniRef50_UPI0000DA34B6 Cluster: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3); n=1; Rattus
norvegicus|Rep: PREDICTED: similar to 60S ribosomal
protein L7a (Surfeit locus protein 3) - Rattus
norvegicus
Length = 156
Score = 43.6 bits (98), Expect = 0.004
Identities = 30/96 (31%), Positives = 39/96 (40%)
Frame = +3
Query: 243 PEGCLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXX 422
P+ L ++LKVPP IN ++ LD TA L K+ K R E
Sbjct: 14 PQKNLYKQLKVPPAINLLSEALDCETATQLLKVTHKCRAERKQEKQQRLPAMLRRKLLAK 73
Query: 423 XXXXXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
P G VT L E K+ +VIAH+V
Sbjct: 74 GSSHSETP-AFPGGAFKVTNLAENKKALLLVIAHNV 108
>UniRef50_UPI0000DC13DB Cluster: UPI0000DC13DB related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC13DB UniRef100 entry -
Rattus norvegicus
Length = 200
Score = 38.7 bits (86), Expect = 0.11
Identities = 32/96 (33%), Positives = 41/96 (42%)
Frame = +3
Query: 270 KVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXXXXXXRPN 449
K+ INQFT L+ L + K RP+T RP
Sbjct: 24 KISLEINQFTHALNWQIVIKLLMLARKSRPDTMQEKKRLLVHSEKKAADQGDISAK-RPP 82
Query: 450 TIRSGTNTVTKLVEKKEXAAVVIAHDVXSYLEXWFF 557
R+ NTV LVEKK+ A +VIAHDV ++E F
Sbjct: 83 IPRAEVNTVITLVEKKK-AQMVIAHDV-DHIELMVF 116
>UniRef50_Q98RU4 Cluster: 60s ribosomal protein L7A; n=1; Guillardia
theta|Rep: 60s ribosomal protein L7A - Guillardia theta
(Cryptomonas phi)
Length = 206
Score = 37.1 bits (82), Expect = 0.33
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 193 RDLSRFVRWPKYIRIQRQKAVFSVV*KCP 279
+D+ +F WPKYI IQRQ+ +FS K P
Sbjct: 41 KDIYKFKIWPKYISIQRQRKIFSTKMKIP 69
>UniRef50_Q07880 Cluster: Putative uncharacterized protein YLL044W
precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
uncharacterized protein YLL044W precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 148
Score = 37.1 bits (82), Expect = 0.33
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = -3
Query: 228 ILGPSYKSGQVTSWLNALTNSKVLWPLLEERIHDLLGLNLFDHQWGGGYF 79
I P SGQV+ WL++L N++VLW + + + L+ L+ +W F
Sbjct: 84 IFWPFDVSGQVSLWLDSLANTEVLWSRVSQWVLSLVRLSGLSTEWSWSNF 133
>UniRef50_UPI000056487F Cluster: UPI000056487F related cluster; n=1;
Mus musculus|Rep: UPI000056487F UniRef100 entry - Mus
musculus
Length = 253
Score = 35.1 bits (77), Expect = 1.4
Identities = 27/94 (28%), Positives = 37/94 (39%)
Frame = +3
Query: 249 GCLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXXXXXXXXXXXXXXXXXXX 428
G L + K+P N FT LD+ A +FK+ +YR E
Sbjct: 63 GILCEQFKIPT-FNYFTYALDQQIATQVFKLSYEYRLE---KKQTRLLATARKRDDGKEK 118
Query: 429 XXXXRPNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
R + +G N +T VE K VVIA +V
Sbjct: 119 VPSKRASAFPTGVNIITTFVENKRAQLVVIAQEV 152
>UniRef50_UPI0000DC0A94 Cluster: UPI0000DC0A94 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0A94 UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 34.3 bits (75), Expect = 2.4
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = +1
Query: 142 FEKRPKNFAIGQGIQPTRDLSRFVRWPKY 228
FEK+PKN G IQ RD FV+WP Y
Sbjct: 19 FEKKPKNAYAGWDIQAKRD-CHFVKWPGY 46
>UniRef50_UPI000156049B Cluster: PREDICTED: hypothetical protein;
n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
- Equus caballus
Length = 257
Score = 33.5 bits (73), Expect = 4.1
Identities = 23/80 (28%), Positives = 35/80 (43%)
Frame = +2
Query: 284 DQPIYPDTGQDYS*GPFQDFGEIQA*D*SSQEREAEESC*S*GCQER*ASTKEAQHHPIR 463
DQP++P G S Q ++QA D + +E EA GC +R EA R
Sbjct: 70 DQPVHPGPGPPDSYSAAQAGPQVQARDKAREEAEAAGPGXEEGCWQRGCPHXEATGPSSR 129
Query: 464 HKHSHQAGREERXRSCGHRS 523
++ H G E+ + R+
Sbjct: 130 GQYCHHLGGEQEGSAGSDRA 149
>UniRef50_A3VUC9 Cluster: Biotin protein ligase; n=1; Parvularcula
bermudensis HTCC2503|Rep: Biotin protein ligase -
Parvularcula bermudensis HTCC2503
Length = 258
Score = 32.7 bits (71), Expect = 7.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +3
Query: 216 MAQVYPHPAPEGCLQRRLKVPPPINQFTQTLD 311
+AQV PH PEG + PPP F +TLD
Sbjct: 149 LAQVPPHAPPEGRALSQWITPPPPTAFLETLD 180
>UniRef50_Q47QY5 Cluster: N utilization substance protein B homolog;
n=5; Actinomycetales|Rep: N utilization substance
protein B homolog - Thermobifida fusca (strain YX)
Length = 142
Score = 32.7 bits (71), Expect = 7.2
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +3
Query: 174 SGHSANS*LVQICKMAQVYPHPAPEGCLQRRLKVPPPINQFTQTL 308
S H A V+I A+V P E +RR + PPIN+FT+ L
Sbjct: 9 SRHKARVRAVEILYEAEVRGVPVSEVIERRRAQTEPPINEFTEQL 53
>UniRef50_Q6IVN1 Cluster: Predicted type I site-specific
deoxyribonuclease specificity subunit; n=1; uncultured
gamma proteobacterium eBACHOT4E07|Rep: Predicted type I
site-specific deoxyribonuclease specificity subunit -
uncultured gamma proteobacterium eBACHOT4E07
Length = 405
Score = 32.3 bits (70), Expect = 9.5
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -1
Query: 425 IFLGNLSFSSFPQPLFPGCFSLRPVFLQNLEKALSCSLVQCLGKLVDRR 279
+F G+L S P+P+ GC L P A+ C++++ LVD+R
Sbjct: 67 VFEGDLLISRLPEPVGRGC--LIPSITSRAITAVDCTIIRVKSDLVDKR 113
>UniRef50_Q8TW47 Cluster: ATPase subunit of an ABC-type transport
system, contains a duplicated ATPase domain; n=5;
Euryarchaeota|Rep: ATPase subunit of an ABC-type
transport system, contains a duplicated ATPase domain -
Methanopyrus kandleri
Length = 568
Score = 32.3 bits (70), Expect = 9.5
Identities = 11/29 (37%), Positives = 23/29 (79%)
Frame = +3
Query: 444 PNTIRSGTNTVTKLVEKKEXAAVVIAHDV 530
P T+RS N++ ++V++++ A V+++HDV
Sbjct: 498 PVTLRSVANSIKRIVDREKIATVLVSHDV 526
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,690,012
Number of Sequences: 1657284
Number of extensions: 9512507
Number of successful extensions: 26349
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 25510
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26317
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44807090004
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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