Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0857
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein... 155 3e-38
Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical pr... 153 7e-38
Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical pr... 153 1e-37
Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical p... 145 2e-35
Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical pr... 145 2e-35
X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein... 145 2e-35
U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein... 145 2e-35
U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein... 145 2e-35
U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein... 145 2e-35
U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protei... 145 2e-35
AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3 pr... 145 2e-35
AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone prote... 145 2e-35
AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone prote... 145 2e-35
Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical pr... 130 1e-30
Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical pr... 88 5e-18
Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical pr... 82 3e-16
U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical pr... 82 3e-16
Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical p... 31 0.82
L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient ... 28 5.8
L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient ... 28 5.8
AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologou... 28 5.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 7.7
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 7.7
>U28732-2|AAB04902.1| 136|Caenorhabditis elegans Histone protein 71
protein.
Length = 136
Score = 155 bits (375), Expect = 3e-38
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 108 bits (259), Expect = 3e-24
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>Z98866-6|CAB11546.1| 136|Caenorhabditis elegans Hypothetical
protein Y49E10.6 protein.
Length = 136
Score = 153 bits (372), Expect = 7e-38
Identities = 75/76 (98%), Positives = 76/76 (100%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKD+QLA
Sbjct: 113 IHAKRVTIMPKDMQLA 128
Score = 108 bits (259), Expect = 3e-24
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>Z74476-1|CAA98963.1| 136|Caenorhabditis elegans Hypothetical
protein W05B10.1 protein.
Length = 136
Score = 153 bits (370), Expect = 1e-37
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELL+RKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLLRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKD+QLA
Sbjct: 113 IHAKRVTIMPKDMQLA 128
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/52 (88%), Positives = 47/52 (90%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRK LATKAARKSA TG VKK HR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKALATKAARKSAIVTGSVKKVHRFRPGTVALREI 52
>Z93388-9|CAB07653.1| 136|Caenorhabditis elegans Hypothetical
protein T10C6.13 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z83245-7|CAB05834.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.7 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z83245-3|CAB05833.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.3 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z83245-2|CAB05831.1| 136|Caenorhabditis elegans Hypothetical
protein ZK131.2 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z82271-1|CAB05209.1| 136|Caenorhabditis elegans Hypothetical
protein F54E12.1 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z81495-3|CAB04057.1| 136|Caenorhabditis elegans Hypothetical
protein F08G2.3 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z73102-11|CAA97411.1| 136|Caenorhabditis elegans Hypothetical
protein B0035.10 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z68336-2|CAA92733.1| 136|Caenorhabditis elegans Hypothetical
protein F22B3.2 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>X15634-2|CAA33644.1| 136|Caenorhabditis elegans Histone protein
protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>U64845-9|AAC48033.1| 136|Caenorhabditis elegans Histone protein 6
protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>U64843-9|AAF98226.1| 136|Caenorhabditis elegans Histone protein 17
protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>U64843-4|AAF98231.1| 136|Caenorhabditis elegans Histone protein 27
protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>U58750-10|AAB00650.1| 136|Caenorhabditis elegans Histone protein
59 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>AF304122-1|AAG50235.1| 136|Caenorhabditis elegans histone H3
protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>AF047656-3|AAC05102.1| 136|Caenorhabditis elegans Histone protein
32 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>AC024696-4|AAK84514.1| 136|Caenorhabditis elegans Histone protein
49 protein.
Length = 136
Score = 145 bits (351), Expect = 2e-35
Identities = 70/76 (92%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKSTELLIR+ PFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RRYQKSTELLIRRAPFQRLVREIAQDFKTDLRFQSSAVMALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP++GGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPASGGVKKPHRYRPGTVALREI 52
>Z38112-1|CAA86228.1| 127|Caenorhabditis elegans Hypothetical
protein E03A3.3 protein.
Length = 127
Score = 139 bits (336), Expect = 2e-33
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
RRYQKST+LL+RKLPFQRLVREIAQD K DLRFQSAAI ALQEASE +LVGLFEDTNLCA
Sbjct: 44 RRYQKSTDLLLRKLPFQRLVREIAQDVKQDLRFQSAAIQALQEASEYFLVGLFEDTNLCA 103
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKD+QLA
Sbjct: 104 IHAKRVTIMPKDMQLA 119
Score = 72.9 bits (171), Expect = 2e-13
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = +1
Query: 136 GGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
GGKAPRKQLATKAARK+A G VKKPHR+RPGTVALREI
Sbjct: 4 GGKAPRKQLATKAARKNAIVVGAVKKPHRFRPGTVALREI 43
>Z38112-2|CAA86229.1| 126|Caenorhabditis elegans Hypothetical
protein E03A3.4 protein.
Length = 126
Score = 130 bits (313), Expect = 1e-30
Identities = 60/75 (80%), Positives = 70/75 (93%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELL+RKLPFQRLVRE+AQ+ ++RFQSAAI AL EA+EAYL+GLFEDTNLCA
Sbjct: 51 RKYQKSTELLVRKLPFQRLVREVAQEIMPNVRFQSAAIQALHEAAEAYLIGLFEDTNLCA 110
Query: 435 IHAKRVTIMPKDIQL 479
IHAKRVTIMPKD+Q+
Sbjct: 111 IHAKRVTIMPKDMQV 125
Score = 70.5 bits (165), Expect = 8e-13
Identities = 38/52 (73%), Positives = 40/52 (76%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTK TARKS GGKAPRK LATKAARK P G VKK RYRP + AL+EI
Sbjct: 1 MARTKHTARKSFGGKAPRKSLATKAARKVFPVDGQVKK--RYRPSSNALKEI 50
>Z22179-3|CAA80160.1| 288|Caenorhabditis elegans Hypothetical
protein F58A4.3 protein.
Length = 288
Score = 87.8 bits (208), Expect = 5e-18
Identities = 46/78 (58%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGALQEASEAYLVGLFEDTN 425
R+YQK+ +LLI+K PF RLVREI Q F D R +S AI ALQEA+EA+LV +FE ++
Sbjct: 202 RKYQKTEDLLIQKAPFARLVREIMQTSTPFGADCRIRSDAISALQEAAEAFLVEMFEGSS 261
Query: 426 LCAIHAKRVTIMPKDIQL 479
L + HAKRVT+M DIQL
Sbjct: 262 LISTHAKRVTLMTTDIQL 279
>Z22178-2|CAA80154.1| 261|Caenorhabditis elegans Hypothetical
protein F54C8.2 protein.
Length = 261
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/78 (55%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQD---FKTDLRFQSAAIGALQEASEAYLVGLFEDTN 425
R+YQ+S +LLI K PF RLVREI Q F +DLR +S AI ALQEASEA LV +F+ ++
Sbjct: 175 RKYQESEDLLIPKAPFARLVREIMQTSTPFSSDLRIRSDAINALQEASEALLVQMFDGSS 234
Query: 426 LCAIHAKRVTIMPKDIQL 479
L + H+KR T+ D+QL
Sbjct: 235 LISAHSKRATLTTTDVQL 252
>U50301-4|AAB37052.1| 118|Caenorhabditis elegans Hypothetical
protein F20D6.9 protein.
Length = 118
Score = 82.2 bits (194), Expect = 3e-16
Identities = 44/76 (57%), Positives = 54/76 (71%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+ Q+STELLI + F+RLV+E+AQDF TDL F+ AI ALQ A E YLV LF NLCA
Sbjct: 35 RKQQQSTELLIPRSRFERLVKELAQDFVTDLIFRKDAIDALQAAVEDYLVELFRLGNLCA 94
Query: 435 IHAKRVTIMPKDIQLA 482
I KRVTI +++ A
Sbjct: 95 IKCKRVTIEADNLKFA 110
>Z81077-10|CAB03064.1| 151|Caenorhabditis elegans Hypothetical
protein F36A2.10 protein.
Length = 151
Score = 30.7 bits (66), Expect = 0.82
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +1
Query: 103 ARTKQTARKSTGGK--APRKQLATKAARKSAP 192
+R++ +R ST GK AP+K + TKAAR +P
Sbjct: 94 SRSRSRSRSSTRGKKRAPKKAVTTKAARSISP 125
>L16685-6|ABD63199.1| 1047|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform b
protein.
Length = 1047
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 128 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 220
+L E+K +++L + R+++RR +V S SHI
Sbjct: 811 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 841
>L16685-5|AAA28167.3| 1027|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 1, isoform a
protein.
Length = 1027
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 128 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 220
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
>AJ276027-1|CAC81654.1| 1027|Caenorhabditis elegans TRP homologous
cation channel proteinprotein.
Length = 1027
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 128 NLLEVKLRVNNLLQKRRENQRRALVESRSHI 220
+L E+K +++L + R+++RR +V S SHI
Sbjct: 791 DLHEIKQDISSLRYELRDDRRREIVRSSSHI 821
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 273 TELLIRKLPFQRLVREIAQDFKT 341
T+LL+R LPF+ V+E+ F+T
Sbjct: 748 TKLLVRNLPFEASVKEVETLFET 770
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 112 KQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 216
++ A KST K K A KAA S+ S+ KKP
Sbjct: 319 EKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 353
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 112 KQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKP 216
++ A KST K K A KAA S+ S+ KKP
Sbjct: 594 EKPAAKSTPAKTTPKPTAKKAASSSSDSSDDEKKP 628
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,856,950
Number of Sequences: 27780
Number of extensions: 227381
Number of successful extensions: 582
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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