Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= br--0857
(596 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 148 2e-36
At5g10400.1 68418.m01206 histone H3 identical to several histone... 148 2e-36
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 148 2e-36
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 148 2e-36
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 148 2e-36
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 146 1e-35
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 145 2e-35
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 145 2e-35
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 145 2e-35
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 144 5e-35
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 142 2e-34
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 139 1e-33
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 128 3e-30
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 73 1e-13
At5g66410.1 68418.m08376 expressed protein 30 1.3
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 28 4.1
At2g03010.1 68415.m00253 expressed protein 28 5.4
At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subuni... 27 7.2
At3g20530.1 68416.m02599 protein kinase family protein contains ... 27 9.5
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 27 9.5
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 52
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 52
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 52
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 52
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 148 bits (359), Expect = 2e-36
Identities = 71/76 (93%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 106 bits (255), Expect = 1e-23
Identities = 50/52 (96%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREI 52
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 146 bits (353), Expect = 1e-35
Identities = 69/76 (90%), Positives = 75/76 (98%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTE+LIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTEILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPK+IQLA
Sbjct: 113 IHAKRVTIMPKEIQLA 128
Score = 98.3 bits (234), Expect = 3e-21
Identities = 46/52 (88%), Positives = 50/52 (96%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPGTVALR+I
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDI 52
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 145 bits (352), Expect = 2e-35
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 108 bits (259), Expect = 3e-24
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 145 bits (352), Expect = 2e-35
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 108 bits (259), Expect = 3e-24
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 145 bits (352), Expect = 2e-35
Identities = 71/76 (93%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKDIQLA
Sbjct: 113 IHAKRVTIMPKDIQLA 128
Score = 108 bits (259), Expect = 3e-24
Identities = 51/52 (98%), Positives = 52/52 (100%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 144 bits (348), Expect = 5e-35
Identities = 69/76 (90%), Positives = 74/76 (97%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELLIRKLPFQRLVREIAQD+KTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKD+QLA
Sbjct: 113 IHAKRVTIMPKDVQLA 128
Score = 100 bits (239), Expect = 8e-22
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKS GGKAPR LATKAARKSAP+TGGVKKPHRYRPGTVALREI
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREI 52
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 142 bits (344), Expect = 2e-34
Identities = 69/76 (90%), Positives = 73/76 (96%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKSTELL RKLPFQRLVREIAQDFKTDLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 53 RKYQKSTELLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 112
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIMPKD+QLA
Sbjct: 113 IHAKRVTIMPKDVQLA 128
Score = 99 bits (238), Expect = 1e-21
Identities = 47/52 (90%), Positives = 50/52 (96%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MARTKQ+ARKS GGKAP KQLATKAARKSAP+TGGVKKPHR+RPGTVALREI
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREI 52
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 139 bits (336), Expect = 1e-33
Identities = 68/76 (89%), Positives = 72/76 (94%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQKST+LLIRKLPFQRLVREIAQDFK DLRFQS A+ ALQEA+EAYLVGLFEDTNLCA
Sbjct: 54 RKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGLFEDTNLCA 113
Query: 435 IHAKRVTIMPKDIQLA 482
IHAKRVTIM KDIQLA
Sbjct: 114 IHAKRVTIMSKDIQLA 129
Score = 88.2 bits (209), Expect = 4e-18
Identities = 43/53 (81%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGVKKPHRYRPGTVALREI 255
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREI
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREI 53
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 128 bits (309), Expect = 3e-30
Identities = 58/76 (76%), Positives = 70/76 (92%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCA 434
R+YQK+T+L+IRKLPFQRLV+EIAQ K DLRFQ+ A+ ALQEA+EA++VG+FEDTNLCA
Sbjct: 48 RKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFMVGMFEDTNLCA 107
Query: 435 IHAKRVTIMPKDIQLA 482
+HAKR TIMPKDIQLA
Sbjct: 108 MHAKRSTIMPKDIQLA 123
Score = 58.4 bits (135), Expect = 3e-09
Identities = 31/52 (59%), Positives = 38/52 (73%)
Frame = +1
Query: 100 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PGTVALREI
Sbjct: 1 MARSNQTARKATGGKAPH--FAMRVWQHSTPP---LKKPYRYKPGTVALREI 47
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 73.3 bits (172), Expect = 1e-13
Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +3
Query: 255 RRYQKSTELLIRKLPFQRLVREIAQDFKTDL--RFQSAAIGALQEASEAYLVGLFEDTNL 428
R +QK T LLI F R VR I R+ + A+ ALQEA+E YLVGLF D+ L
Sbjct: 91 RHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVGLFSDSML 150
Query: 429 CAIHAKRVTIMPKDIQLA 482
CAIHA+RVT+M KD +LA
Sbjct: 151 CAIHARRVTLMRKDFELA 168
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1
Query: 109 TKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREI 255
T+QT ++ R+ K +R++ P G KK +RYRPGTVAL+EI
Sbjct: 45 TQQTNPTTSPATGTRR--GAKRSRQAMPR-GSQKKSYRYRPGTVALKEI 90
>At5g66410.1 68418.m08376 expressed protein
Length = 230
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 285 IRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMP 464
+ L F ++ A+D+K ++ A G+ E L L +D L +HA R+ +
Sbjct: 10 LSNLAFGNVLAAAARDYKKEVLANEKAQGSRPVNEEVDLDELMDDPELEKLHADRIAALR 69
Query: 465 KDIQ 476
++++
Sbjct: 70 REVE 73
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 164 ASCLRGALPPVDLRAVCLVRAIVYFFNVFH 75
A C +G +P + L A+ V ++F VFH
Sbjct: 132 AQCKKGYVPLISLNALHQVHIFIFFLAVFH 161
>At2g03010.1 68415.m00253 expressed protein
Length = 246
Score = 27.9 bits (59), Expect = 5.4
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = -1
Query: 494 RIRRSKLNILRHDGHTFGVNSTQVGVFEQANEISLACLLESSDGGRLETQISFEILS-DF 318
R S+L +LR+ + + GV E+ N+ + + E DGG + + +S
Sbjct: 155 RDAESRLEVLRNVRGLAPLTGGREGVLEKRNDENDSVRGEGDDGGCGGYEAKKKKMSGKK 214
Query: 317 SHKTLERQLTDKQLSRLLITTISRRA 240
S K L+R+ +K+ R L S+RA
Sbjct: 215 SLKELKRERVEKERERALFMKQSQRA 240
>At5g56280.1 68418.m07024 COP9 signalosome subunit 6 / CSN subunit 6
(CSN6A) identical to CSN complex subunit 6A [Arabidopsis
thaliana] GI:18056665, COP9 complex subunit 6
[Arabidopsis thaliana] GI:15809663; contains Pfam
profile PF01398: Mov34/MPN/PAD-1 family; identical to
cDNA CSN complex subunit 6A (CSN6A) GI:18056664
Length = 317
Score = 27.5 bits (58), Expect = 7.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -1
Query: 410 QANEISLACLLESSDGGRLETQISFEILSDFSHKTLERQLTDKQ 279
Q N C++ G +E SFE+L D S +TL+R +K+
Sbjct: 53 QQNPRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKK 96
>At3g20530.1 68416.m02599 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 386
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -2
Query: 487 VEAS*ISFGMMVTRLA*IAHKLVSSNKPTR*ASLASWRAPMAADWKRKSVL 335
V++ SFG++ + +++ + KPT +L +W +P+ D +RK L
Sbjct: 266 VKSDVYSFGVVFLEMI-TGRRVIDTTKPTEEQNLVTWASPLFKD-RRKFTL 314
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 56 KISSLTCEKH*KSKQWLVLNKQPVNLLEVKLRVNNLLQKRRENQR 190
K+ EKH K KQ +V N P L NL+++RR+ QR
Sbjct: 1306 KLIKAVYEKHPKPKQLIVENDLPQKL-------QNLIEERRDGQR 1343
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,203,947
Number of Sequences: 28952
Number of extensions: 212964
Number of successful extensions: 604
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1190791976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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